Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
Traf1P39428 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.53□□□□□ -1.84
Traf1P39428 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm25539-201ENSMUST00000116886 122 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm15312-201ENSMUST00000118827 271 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm15309-201ENSMUST00000121644 240 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Traf1P39428 Gm23470-201ENSMUST00000157129 120 ntBASIC3.53□□□□□ -1.84
Traf1P39428 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm2930-201ENSMUST00000170403 474 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm27659-201ENSMUST00000183472 98 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm37616-201ENSMUST00000193974 322 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm44223-201ENSMUST00000204854 114 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Gm9068-201ENSMUST00000217393 455 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.53□□□□□ -1.84
Traf1P39428 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Traf1P39428 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Traf1P39428 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Traf1P39428 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Traf1P39428 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Traf1P39428 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Traf1P39428 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.53□□□□□ -1.84
Traf1P39428 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
Traf1P39428 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Traf1P39428 Gm14594-201ENSMUST00000118052 537 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm14590-201ENSMUST00000118934 537 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm11943-201ENSMUST00000119473 327 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm6587-201ENSMUST00000120219 613 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm13901-201ENSMUST00000137252 468 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm23538-201ENSMUST00000157535 101 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm25413-201ENSMUST00000158544 312 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm23145-201ENSMUST00000178912 79 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm14596-201ENSMUST00000180268 537 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm14595-201ENSMUST00000180335 537 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC3.52□□□□□ -1.85
Traf1P39428 Gm18551-201ENSMUST00000195594 642 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm18748-201ENSMUST00000198507 622 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm29817-201ENSMUST00000210098 172 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Gm30534-201ENSMUST00000217928 207 ntBASIC3.52□□□□□ -1.85
Traf1P39428 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.52□□□□□ -1.85
Traf1P39428 Gm46193-201ENSMUST00000219399 364 ntBASIC3.52□□□□□ -1.85
Traf1P39428 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Traf1P39428 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Traf1P39428 Gm22249-201ENSMUST00000082485 136 ntBASIC3.52□□□□□ -1.85
Traf1P39428 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Traf1P39428 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Traf1P39428 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Traf1P39428 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Traf1P39428 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Traf1P39428 Gm11321-201ENSMUST00000121257 902 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Gm11229-201ENSMUST00000121993 437 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Gm22718-201ENSMUST00000122701 315 ntBASIC3.51□□□□□ -1.85
Traf1P39428 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.51□□□□□ -1.85
Traf1P39428 Gm18520-201ENSMUST00000174783 658 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Mir3965-201ENSMUST00000175570 69 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Gm24100-201ENSMUST00000178592 79 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Gm29597-201ENSMUST00000188035 308 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.51□□□□□ -1.85
Traf1P39428 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.51□□□□□ -1.85
Traf1P39428 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.51□□□□□ -1.85
Traf1P39428 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.51□□□□□ -1.85
Traf1P39428 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.51□□□□□ -1.85
Traf1P39428 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.51□□□□□ -1.85
Traf1P39428 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.51□□□□□ -1.85
Traf1P39428 Gm46994-201ENSMUST00000221523 219 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Gm19540-201ENSMUST00000221843 810 ntBASIC3.51□□□□□ -1.85
Traf1P39428 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Traf1P39428 Gm5955-201ENSMUST00000222712 219 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Traf1P39428 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.51□□□□□ -1.85
Traf1P39428 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.51□□□□□ -1.85
Traf1P39428 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Traf1P39428 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Traf1P39428 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Traf1P39428 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Traf1P39428 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Traf1P39428 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Traf1P39428 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Traf1P39428 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Traf1P39428 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Traf1P39428 Gm14359-201ENSMUST00000118883 424 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm12156-201ENSMUST00000119188 554 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm14867-201ENSMUST00000120156 866 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm14360-201ENSMUST00000120670 393 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm9498-201ENSMUST00000140849 291 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 123.9 ms