Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.86□□□□□ -1.63
RaraP11416 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.86□□□□□ -1.63
RaraP11416 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RaraP11416 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RaraP11416 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RaraP11416 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RaraP11416 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RaraP11416 Mir687-201ENSMUST00000102166 89 ntBASIC4.85□□□□□ -1.63
RaraP11416 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RaraP11416 Gm24867-201ENSMUST00000104161 107 ntBASIC4.85□□□□□ -1.63
RaraP11416 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.85□□□□□ -1.63
RaraP11416 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.85□□□□□ -1.63
RaraP11416 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm12571-201ENSMUST00000118132 243 ntBASIC4.85□□□□□ -1.63
RaraP11416 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm12191-201ENSMUST00000118307 348 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm9703-201ENSMUST00000119573 343 ntBASIC4.85□□□□□ -1.63
RaraP11416 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.85□□□□□ -1.63
RaraP11416 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RaraP11416 Gm25621-201ENSMUST00000157223 114 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm22870-201ENSMUST00000157501 112 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm30280-201ENSMUST00000192214 262 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm44324-201ENSMUST00000198517 135 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.85□□□□□ -1.63
RaraP11416 Gm45392-201ENSMUST00000210441 214 ntBASIC4.85□□□□□ -1.63
RaraP11416 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.85□□□□□ -1.63
RaraP11416 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm6462-201ENSMUST00000081488 304 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm22220-201ENSMUST00000082671 149 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm10343-201ENSMUST00000096279 348 ntBASIC4.85□□□□□ -1.63
RaraP11416 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RaraP11416 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RaraP11416 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
RaraP11416 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RaraP11416 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
RaraP11416 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.85□□□□□ -1.63
RaraP11416 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RaraP11416 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RaraP11416 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RaraP11416 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RaraP11416 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RaraP11416 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
RaraP11416 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RaraP11416 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RaraP11416 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RaraP11416 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.84□□□□□ -1.63
RaraP11416 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
RaraP11416 Gm23841-201ENSMUST00000116951 114 ntBASIC4.84□□□□□ -1.63
RaraP11416 Gm6274-201ENSMUST00000118173 797 ntBASIC4.84□□□□□ -1.63
RaraP11416 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.84□□□□□ -1.63
RaraP11416 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.84□□□□□ -1.63
RaraP11416 Gm22968-201ENSMUST00000157955 118 ntBASIC4.84□□□□□ -1.63
RaraP11416 Gm24905-201ENSMUST00000158129 104 ntBASIC4.84□□□□□ -1.63
RaraP11416 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RaraP11416 Gm28623-201ENSMUST00000187219 192 ntBASIC4.84□□□□□ -1.63
RaraP11416 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.84□□□□□ -1.63
RaraP11416 Gm44184-201ENSMUST00000204290 132 ntBASIC4.84□□□□□ -1.63
RaraP11416 Gm6303-201ENSMUST00000210123 471 ntBASIC4.84□□□□□ -1.63
RaraP11416 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.84□□□□□ -1.63
RaraP11416 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RaraP11416 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RaraP11416 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.84□□□□□ -1.64
RaraP11416 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RaraP11416 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RaraP11416 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RaraP11416 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.83□□□□□ -1.64
RaraP11416 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RaraP11416 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RaraP11416 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RaraP11416 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RaraP11416 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm15151-201ENSMUST00000117106 177 ntBASIC4.83□□□□□ -1.64
RaraP11416 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm11398-201ENSMUST00000120330 320 ntBASIC4.83□□□□□ -1.64
RaraP11416 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.83□□□□□ -1.64
RaraP11416 Gm24348-201ENSMUST00000158710 130 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm23921-201ENSMUST00000175258 107 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm25235-201ENSMUST00000179933 107 ntBASIC4.83□□□□□ -1.64
RaraP11416 Mir7022-201ENSMUST00000183749 61 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm27245-201ENSMUST00000184385 376 ntBASIC4.83□□□□□ -1.64
RaraP11416 Mir5121-201ENSMUST00000198528 74 ntBASIC4.83□□□□□ -1.64
RaraP11416 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.83□□□□□ -1.64
RaraP11416 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RaraP11416 Gm22061-201ENSMUST00000082557 107 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm23932-201ENSMUST00000082914 107 ntBASIC4.83□□□□□ -1.64
RaraP11416 Mir17-201ENSMUST00000083574 84 ntBASIC4.83□□□□□ -1.64
RaraP11416 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
RaraP11416 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.83□□□□□ -1.64
RaraP11416 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RaraP11416 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RaraP11416 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RaraP11416 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RaraP11416 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RaraP11416 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RaraP11416 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.82□□□□□ -1.64
RaraP11416 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RaraP11416 Gm23594-201ENSMUST00000104307 134 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms