Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Lire1P11260 Gm38268-201ENSMUST00000195813 193 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm44392-201ENSMUST00000196758 115 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm44295-201ENSMUST00000203805 437 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm34701-202ENSMUST00000204685 360 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm44954-201ENSMUST00000208513 227 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Lire1P11260 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Lire1P11260 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm23738-201ENSMUST00000082828 171 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Lire1P11260 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Lire1P11260 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lire1P11260 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lire1P11260 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Lire1P11260 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Lire1P11260 Gm14622-201ENSMUST00000117117 468 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Gm14901-201ENSMUST00000119001 283 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Gm15466-201ENSMUST00000122299 333 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Gm22452-201ENSMUST00000122804 104 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.11□□□□□ -1.91
Lire1P11260 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Lire1P11260 Gm24813-201ENSMUST00000175310 84 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.11□□□□□ -1.91
Lire1P11260 Gm26177-201ENSMUST00000178683 107 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Gm18486-201ENSMUST00000184040 298 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Gm37319-201ENSMUST00000193500 636 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Gm7871-201ENSMUST00000195346 618 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Gm44084-201ENSMUST00000203947 409 ntBASIC3.11□□□□□ -1.91
Lire1P11260 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.11□□□□□ -1.91
Lire1P11260 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.11□□□□□ -1.91
Lire1P11260 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.11□□□□□ -1.91
Lire1P11260 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Lire1P11260 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.11□□□□□ -1.91
Lire1P11260 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Lire1P11260 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Lire1P11260 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Lire1P11260 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lire1P11260 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Lire1P11260 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm11556-201ENSMUST00000120751 288 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm14694-201ENSMUST00000121856 282 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm25295-201ENSMUST00000122794 306 ntBASIC3.1□□□□□ -1.91
Lire1P11260 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm23648-201ENSMUST00000180301 107 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.1□□□□□ -1.91
Lire1P11260 Mir8106-201ENSMUST00000184520 139 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm27249-201ENSMUST00000185049 328 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm17946-201ENSMUST00000186856 538 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm29263-201ENSMUST00000188718 463 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm28384-201ENSMUST00000189079 463 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm3489-201ENSMUST00000190083 528 ntBASIC3.1□□□□□ -1.91
Lire1P11260 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm43284-201ENSMUST00000200103 253 ntBASIC3.1□□□□□ -1.91
Lire1P11260 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.1□□□□□ -1.91
Lire1P11260 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.1□□□□□ -1.91
Lire1P11260 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Lire1P11260 Gm23506-201ENSMUST00000083077 107 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm24533-201ENSMUST00000083138 196 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Lire1P11260 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Lire1P11260 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Lire1P11260 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.1□□□□□ -1.91
Lire1P11260 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Lire1P11260 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Lire1P11260 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Lire1P11260 Gm11913-201ENSMUST00000119094 336 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm5762-201ENSMUST00000119204 258 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm11598-201ENSMUST00000119257 357 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Lire1P11260 Gm25438-201ENSMUST00000158281 110 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Lire1P11260 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Gm23933-201ENSMUST00000178405 79 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm25873-201ENSMUST00000180317 107 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm27783-201ENSMUST00000183534 105 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm28666-201ENSMUST00000186649 274 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Gm28169-201ENSMUST00000190342 345 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.09□□□□□ -1.91
Lire1P11260 Gm43193-201ENSMUST00000197732 441 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Lire1P11260 Gm2544-201ENSMUST00000222702 756 ntBASIC3.09□□□□□ -1.91
Lire1P11260 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms