Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm24350-201ENSMUST00000104163 133 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm22215-201ENSMUST00000157558 96 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm23641-201ENSMUST00000157857 101 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm22637-201ENSMUST00000158144 283 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm24552-201ENSMUST00000158646 103 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm25457-201ENSMUST00000179509 107 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Mir7006-201ENSMUST00000183624 69 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Mir6412-201ENSMUST00000184477 97 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Stk-ps2-204ENSMUST00000187808 616 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm34176-201ENSMUST00000192621 474 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Mir6994-201ENSMUST00000198985 73 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm44214-201ENSMUST00000204153 606 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.09□□□□□ -1.75
Hoxd3P09027 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 AC170999.2-201ENSMUST00000226223 264 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 AC165415.1-201ENSMUST00000228924 273 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm24152-201ENSMUST00000082764 163 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Mir31-201ENSMUST00000083474 106 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Mir21a-201ENSMUST00000083521 92 ntBASIC4.09□□□□□ -1.75
Hoxd3P09027 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Hoxd3P09027 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Hoxd3P09027 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Hoxd3P09027 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd3P09027 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Hoxd3P09027 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Hoxd3P09027 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Hoxd3P09027 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.09□□□□□ -1.76
Hoxd3P09027 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Hoxd3P09027 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Hoxd3P09027 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.09□□□□□ -1.76
Hoxd3P09027 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm24170-201ENSMUST00000104124 133 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm24789-201ENSMUST00000104282 131 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm24234-201ENSMUST00000104316 107 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm14073-201ENSMUST00000117344 381 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm15282-201ENSMUST00000117707 300 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm11550-201ENSMUST00000118210 699 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm12304-201ENSMUST00000120312 385 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm17014-201ENSMUST00000120765 168 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm23743-201ENSMUST00000157389 274 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm26157-201ENSMUST00000158974 126 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Scarna10-201ENSMUST00000158992 325 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm7909-201ENSMUST00000182688 614 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Mir21b-201ENSMUST00000184317 108 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm36259-201ENSMUST00000197340 392 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm6240-201ENSMUST00000208014 473 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm18502-201ENSMUST00000218679 199 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm23972-201ENSMUST00000083322 165 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd3P09027 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.08□□□□□ -1.76
Hoxd3P09027 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd3P09027 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd3P09027 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd3P09027 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm23274-201ENSMUST00000104056 130 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm14861-201ENSMUST00000119451 455 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm12238-201ENSMUST00000127764 124 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm25967-201ENSMUST00000157168 147 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm22212-201ENSMUST00000158096 106 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms