Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm13581-201ENSMUST00000120675 278 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm14919-201ENSMUST00000120839 390 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm22478-201ENSMUST00000122570 154 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm15899-201ENSMUST00000128586 238 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col3a1P08121 Gm25280-201ENSMUST00000157269 101 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.57□□□□□ -1.84
Col3a1P08121 Gm17030-201ENSMUST00000167016 393 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm24315-201ENSMUST00000177835 127 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm25360-201ENSMUST00000178786 191 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm27957-201ENSMUST00000184054 127 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm27700-201ENSMUST00000185003 81 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm9632-201ENSMUST00000195934 643 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.57□□□□□ -1.84
Col3a1P08121 Gm43368-201ENSMUST00000200638 409 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm44857-201ENSMUST00000208331 196 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm45474-201ENSMUST00000209471 408 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm18441-201ENSMUST00000223539 617 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm7204-201ENSMUST00000062591 600 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Col3a1P08121 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col3a1P08121 Gm23345-201ENSMUST00000083817 150 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col3a1P08121 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col3a1P08121 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Col3a1P08121 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Col3a1P08121 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col3a1P08121 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.57□□□□□ -1.84
Col3a1P08121 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col3a1P08121 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col3a1P08121 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col3a1P08121 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col3a1P08121 Gm24122-201ENSMUST00000104107 132 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm25485-201ENSMUST00000104120 132 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.56□□□□□ -1.84
Col3a1P08121 Gm26024-201ENSMUST00000158657 322 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm22664-201ENSMUST00000158719 105 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm9593-201ENSMUST00000166034 469 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col3a1P08121 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col3a1P08121 Gm27313-201ENSMUST00000183500 142 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.56□□□□□ -1.84
Col3a1P08121 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.56□□□□□ -1.84
Col3a1P08121 Gm37715-201ENSMUST00000193206 235 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm37111-201ENSMUST00000193250 634 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm42465-201ENSMUST00000197036 492 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm18327-201ENSMUST00000202426 830 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col3a1P08121 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Gm18113-201ENSMUST00000220630 303 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col3a1P08121 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col3a1P08121 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.56□□□□□ -1.84
Col3a1P08121 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col3a1P08121 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm26002-201ENSMUST00000101915 107 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm13672-201ENSMUST00000117554 459 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm6664-201ENSMUST00000119138 468 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm11252-201ENSMUST00000120572 939 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm24358-201ENSMUST00000158424 288 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.55□□□□□ -1.84
Col3a1P08121 Cfap61-214ENSMUST00000167179 183 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col3a1P08121 Gm20773-201ENSMUST00000178940 681 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col3a1P08121 Mir496b-201ENSMUST00000184935 113 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.55□□□□□ -1.84
Col3a1P08121 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.55□□□□□ -1.84
Col3a1P08121 Gm45789-201ENSMUST00000213038 364 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col3a1P08121 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col3a1P08121 Gm4945-201ENSMUST00000075152 453 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm22364-201ENSMUST00000083097 98 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Gm25512-201ENSMUST00000083863 107 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col3a1P08121 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col3a1P08121 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col3a1P08121 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col3a1P08121 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col3a1P08121 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.55□□□□□ -1.84
Col3a1P08121 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col3a1P08121 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col3a1P08121 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm14238-201ENSMUST00000120227 323 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms