Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm23600-201ENSMUST00000157260 71 ntBASIC2.66□□□□□ -1.98
TnfP06804 Gm22853-201ENSMUST00000174974 131 ntBASIC2.66□□□□□ -1.98
TnfP06804 Mir3075-201ENSMUST00000175340 85 ntBASIC2.66□□□□□ -1.98
TnfP06804 Gm27698-201ENSMUST00000184060 249 ntBASIC2.66□□□□□ -1.98
TnfP06804 Gm28650-201ENSMUST00000188413 411 ntBASIC2.66□□□□□ -1.98
TnfP06804 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TnfP06804 Trbv7-201ENSMUST00000193339 402 ntBASIC2.66□□□□□ -1.98
TnfP06804 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.66□□□□□ -1.98
TnfP06804 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.66□□□□□ -1.98
TnfP06804 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.66□□□□□ -1.98
TnfP06804 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.66□□□□□ -1.98
TnfP06804 Gm44520-201ENSMUST00000205447 802 ntBASIC2.66□□□□□ -1.98
TnfP06804 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.66□□□□□ -1.98
TnfP06804 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.66□□□□□ -1.98
TnfP06804 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TnfP06804 Mir127-201ENSMUST00000093568 70 ntBASIC2.66□□□□□ -1.98
TnfP06804 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
TnfP06804 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TnfP06804 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
TnfP06804 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
TnfP06804 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
TnfP06804 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.65□□□□□ -1.98
TnfP06804 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.98
TnfP06804 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
TnfP06804 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.65□□□□□ -1.99
TnfP06804 Gm25529-201ENSMUST00000104850 92 ntBASIC2.65□□□□□ -1.99
TnfP06804 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm14669-201ENSMUST00000118841 250 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm12507-201ENSMUST00000119155 415 ntBASIC2.65□□□□□ -1.99
TnfP06804 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.65□□□□□ -1.99
TnfP06804 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.65□□□□□ -1.99
TnfP06804 Gm25866-201ENSMUST00000158245 112 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm25863-201ENSMUST00000158249 329 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm8580-201ENSMUST00000160295 464 ntBASIC2.65□□□□□ -1.99
TnfP06804 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TnfP06804 Gm5967-201ENSMUST00000172723 494 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm22858-201ENSMUST00000174972 76 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm24754-201ENSMUST00000177997 107 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm8392-201ENSMUST00000185647 835 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm19257-201ENSMUST00000186121 183 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm6651-201ENSMUST00000189471 271 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm38311-201ENSMUST00000192945 165 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.65□□□□□ -1.99
TnfP06804 Gm6796-201ENSMUST00000211919 243 ntBASIC2.65□□□□□ -1.99
TnfP06804 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.65□□□□□ -1.99
TnfP06804 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.65□□□□□ -1.99
TnfP06804 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.65□□□□□ -1.99
TnfP06804 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm18557-201ENSMUST00000218710 433 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm31849-201ENSMUST00000220306 375 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm5374-201ENSMUST00000222868 657 ntBASIC2.65□□□□□ -1.99
TnfP06804 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.65□□□□□ -1.99
TnfP06804 Gm26203-201ENSMUST00000082911 114 ntBASIC2.65□□□□□ -1.99
TnfP06804 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
TnfP06804 Gm13454-201ENSMUST00000118166 483 ntBASIC2.64□□□□□ -1.99
TnfP06804 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
TnfP06804 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TnfP06804 Gm14159-201ENSMUST00000119832 451 ntBASIC2.64□□□□□ -1.99
TnfP06804 Gm14238-201ENSMUST00000120227 323 ntBASIC2.64□□□□□ -1.99
TnfP06804 Gm24840-201ENSMUST00000122603 147 ntBASIC2.64□□□□□ -1.99
TnfP06804 Gm23889-201ENSMUST00000122689 104 ntBASIC2.64□□□□□ -1.99
TnfP06804 Gm25666-201ENSMUST00000157702 107 ntBASIC2.64□□□□□ -1.99
TnfP06804 Gm17061-201ENSMUST00000163167 499 ntBASIC2.64□□□□□ -1.99
TnfP06804 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.64□□□□□ -1.99
TnfP06804 Gm5268-201ENSMUST00000189212 940 ntBASIC2.64□□□□□ -1.99
TnfP06804 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.64□□□□□ -1.99
TnfP06804 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.64□□□□□ -1.99
TnfP06804 Gm44058-201ENSMUST00000204335 467 ntBASIC2.64□□□□□ -1.99
TnfP06804 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.64□□□□□ -1.99
TnfP06804 Gm7753-201ENSMUST00000221007 867 ntBASIC2.64□□□□□ -1.99
TnfP06804 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.64□□□□□ -1.99
TnfP06804 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.64□□□□□ -1.99
TnfP06804 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TnfP06804 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
TnfP06804 Gm23932-201ENSMUST00000082914 107 ntBASIC2.64□□□□□ -1.99
TnfP06804 Mir421-201ENSMUST00000083575 76 ntBASIC2.64□□□□□ -1.99
TnfP06804 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TnfP06804 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
TnfP06804 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.64□□□□□ -1.99
TnfP06804 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TnfP06804 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.63□□□□□ -1.99
TnfP06804 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
TnfP06804 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
TnfP06804 Gm23691-201ENSMUST00000101878 107 ntBASIC2.63□□□□□ -1.99
TnfP06804 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
TnfP06804 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TnfP06804 Gm22072-201ENSMUST00000116850 121 ntBASIC2.63□□□□□ -1.99
TnfP06804 Gm13329-201ENSMUST00000117063 265 ntBASIC2.63□□□□□ -1.99
TnfP06804 Gm13756-201ENSMUST00000117618 222 ntBASIC2.63□□□□□ -1.99
TnfP06804 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.63□□□□□ -1.99
TnfP06804 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.63□□□□□ -1.99
TnfP06804 Gm16289-201ENSMUST00000162079 183 ntBASIC2.63□□□□□ -1.99
TnfP06804 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TnfP06804 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.63□□□□□ -1.99
TnfP06804 Gm37533-201ENSMUST00000193848 545 ntBASIC2.63□□□□□ -1.99
TnfP06804 Gm30341-201ENSMUST00000194363 289 ntBASIC2.63□□□□□ -1.99
TnfP06804 Gm37989-201ENSMUST00000195202 803 ntBASIC2.63□□□□□ -1.99
TnfP06804 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.63□□□□□ -1.99
TnfP06804 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 155.8 ms