Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC129541.1-201ENSMUST00000226940 523 ntBASIC1.8□□□□□ -2.12
Hmgb3O54879 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Hmgb3O54879 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Hmgb3O54879 Gm25792-201ENSMUST00000083289 100 ntBASIC1.8□□□□□ -2.12
Hmgb3O54879 AF357428-201ENSMUST00000083815 69 ntBASIC1.8□□□□□ -2.12
Hmgb3O54879 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Hmgb3O54879 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Hmgb3O54879 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.8□□□□□ -2.12
Hmgb3O54879 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Hmgb3O54879 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm15161-201ENSMUST00000117340 387 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm23324-201ENSMUST00000157421 131 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Atp2b4-208ENSMUST00000167348 243 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.79□□□□□ -2.12
Hmgb3O54879 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Hmgb3O54879 Mir7021-201ENSMUST00000197026 63 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm43405-201ENSMUST00000198642 337 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm3442-201ENSMUST00000216808 710 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm30534-201ENSMUST00000217928 207 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.79□□□□□ -2.12
Hmgb3O54879 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm19233-201ENSMUST00000219772 936 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 CT009733.1-201ENSMUST00000225322 425 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 AC117656.3-204ENSMUST00000225656 859 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.79□□□□□ -2.12
Hmgb3O54879 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Hmgb3O54879 Gm24044-201ENSMUST00000083107 156 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Snora69-201ENSMUST00000083708 131 ntBASIC1.79□□□□□ -2.12
Hmgb3O54879 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Hmgb3O54879 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Hmgb3O54879 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Hmgb3O54879 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm13085-201ENSMUST00000118356 171 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm12513-201ENSMUST00000118617 352 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm12640-201ENSMUST00000120097 310 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm24937-201ENSMUST00000122597 134 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm25866-201ENSMUST00000158245 112 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Adgrg4-206ENSMUST00000168724 531 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Mir3112-201ENSMUST00000175431 82 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm43355-201ENSMUST00000196541 346 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm44295-201ENSMUST00000203805 437 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm44404-201ENSMUST00000203979 636 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm43897-201ENSMUST00000204019 309 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Hmgb3O54879 AC122901.2-201ENSMUST00000216926 285 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Hmgb3O54879 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Gm22622-201ENSMUST00000082870 129 ntBASIC1.78□□□□□ -2.12
Hmgb3O54879 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Hmgb3O54879 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm24120-201ENSMUST00000103978 129 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm14073-201ENSMUST00000117344 381 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm14677-201ENSMUST00000117866 486 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm14794-201ENSMUST00000118181 192 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm14411-201ENSMUST00000121798 914 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm12443-201ENSMUST00000122308 323 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Hmgb3O54879 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm14651-201ENSMUST00000147192 442 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm8392-201ENSMUST00000185647 835 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm37213-201ENSMUST00000193077 586 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm44938-201ENSMUST00000208614 427 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm45247-201ENSMUST00000210757 309 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm45860-201ENSMUST00000212700 334 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm35262-201ENSMUST00000215133 267 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm19118-201ENSMUST00000222554 98 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 AC126440.1-201ENSMUST00000227098 349 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 AC139294.2-201ENSMUST00000227159 285 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.77□□□□□ -2.13
Hmgb3O54879 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Hmgb3O54879 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm6954-201ENSMUST00000117416 225 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms