Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm22496-201ENSMUST00000104493 88 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm15058-201ENSMUST00000117689 458 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm5958-201ENSMUST00000147698 297 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm22435-201ENSMUST00000158552 128 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm24739-201ENSMUST00000158855 292 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm8207-201ENSMUST00000171204 502 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm25175-201ENSMUST00000178712 79 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Mir6715-201ENSMUST00000184990 57 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm20923-201ENSMUST00000190009 319 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm37128-201ENSMUST00000192599 232 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm43524-201ENSMUST00000197278 298 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm44083-201ENSMUST00000203114 337 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Snora31-201ENSMUST00000083213 130 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm25411-201ENSMUST00000083760 151 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm23796-201ENSMUST00000084011 160 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim55G3X8Y1 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm11923-201ENSMUST00000118135 508 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm11633-201ENSMUST00000118176 444 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm13314-201ENSMUST00000118742 335 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm13153-201ENSMUST00000120969 637 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm14821-201ENSMUST00000121975 435 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm16358-201ENSMUST00000146046 210 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm26149-201ENSMUST00000157432 108 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm27999-201ENSMUST00000183539 193 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm27624-201ENSMUST00000185047 177 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm28148-201ENSMUST00000186924 697 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm37029-201ENSMUST00000195773 239 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm38088-201ENSMUST00000195829 241 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm6240-201ENSMUST00000208014 473 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.34□□□□□ -1.71
Trim55G3X8Y1 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm9512-201ENSMUST00000223112 497 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm23679-201ENSMUST00000083161 119 ntBASIC4.34□□□□□ -1.71
Trim55G3X8Y1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim55G3X8Y1 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.34□□□□□ -1.72
Trim55G3X8Y1 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.34□□□□□ -1.72
Trim55G3X8Y1 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Trim55G3X8Y1 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 AC121844.2-201ENSMUST00000219067 2066 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm13213-201ENSMUST00000119668 474 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm23214-201ENSMUST00000122716 157 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm22988-201ENSMUST00000122759 144 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm26153-201ENSMUST00000157433 127 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm22257-201ENSMUST00000158687 301 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm15914-201ENSMUST00000161922 309 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm32033-201ENSMUST00000193483 339 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm38356-201ENSMUST00000194313 408 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 AC138290.2-201ENSMUST00000218822 369 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm23721-201ENSMUST00000083005 107 ntBASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim55G3X8Y1 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.32□□□□□ -1.72
Trim55G3X8Y1 Gm24855-201ENSMUST00000104848 97 ntBASIC4.32□□□□□ -1.72
Trim55G3X8Y1 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.32□□□□□ -1.72
Trim55G3X8Y1 Gm12238-201ENSMUST00000127764 124 ntBASIC4.32□□□□□ -1.72
Trim55G3X8Y1 Gm23702-201ENSMUST00000158840 130 ntBASIC4.32□□□□□ -1.72
Trim55G3X8Y1 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim55G3X8Y1 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
Trim55G3X8Y1 Gm9696-202ENSMUST00000191541 830 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms