Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ccdc9bA3KGF9 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.44□□□□□ -1.7
Ccdc9bA3KGF9 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.44□□□□□ -1.7
Ccdc9bA3KGF9 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Snord66-201ENSMUST00000104051 75 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm24831-201ENSMUST00000116778 126 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm24839-201ENSMUST00000122602 107 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm25913-201ENSMUST00000157617 135 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm22611-201ENSMUST00000158288 150 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm27528-201ENSMUST00000183544 205 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm27611-201ENSMUST00000184690 108 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm43441-201ENSMUST00000201458 205 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm43955-201ENSMUST00000204332 142 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Gm5899-201ENSMUST00000071770 270 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc9bA3KGF9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24867-201ENSMUST00000104161 107 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm22468-201ENSMUST00000116680 120 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm26248-201ENSMUST00000116700 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm26137-201ENSMUST00000116701 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm26190-201ENSMUST00000116704 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24617-201ENSMUST00000116705 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm25778-201ENSMUST00000116713 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm25774-201ENSMUST00000116717 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm22102-201ENSMUST00000116730 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm23177-201ENSMUST00000116784 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24193-201ENSMUST00000116801 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24744-201ENSMUST00000116833 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24427-201ENSMUST00000116896 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm22346-201ENSMUST00000116918 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm23606-201ENSMUST00000116938 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm22029-201ENSMUST00000116940 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm26298-201ENSMUST00000116956 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm23844-201ENSMUST00000116959 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24484-201ENSMUST00000117009 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm25347-201ENSMUST00000117026 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm22112-201ENSMUST00000117032 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm14067-201ENSMUST00000119340 314 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm11693-201ENSMUST00000119625 565 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm12190-201ENSMUST00000120001 187 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm12721-201ENSMUST00000120621 268 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm23887-201ENSMUST00000122683 172 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm23993-201ENSMUST00000157478 144 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24690-201ENSMUST00000157759 97 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm22991-201ENSMUST00000178126 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm25754-201ENSMUST00000178653 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm22419-201ENSMUST00000178780 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24802-201ENSMUST00000178897 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm22367-201ENSMUST00000178930 132 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm25208-201ENSMUST00000178964 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm24567-201ENSMUST00000179294 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm23943-201ENSMUST00000179712 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm25228-201ENSMUST00000180121 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm23304-201ENSMUST00000180209 121 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Mir6336-201ENSMUST00000183581 130 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm37763-201ENSMUST00000193445 120 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Mir3535-201ENSMUST00000197651 147 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm17951-201ENSMUST00000198536 496 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm43583-201ENSMUST00000199235 303 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm43600-201ENSMUST00000202134 223 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm44960-201ENSMUST00000207403 141 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.42□□□□□ -1.7
Ccdc9bA3KGF9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms