Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm23615-201ENSMUST00000082602 65 ntBASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trbv1A0A0B4J1G7 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm12607-201ENSMUST00000120724 493 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm12095-201ENSMUST00000121962 816 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm25979-201ENSMUST00000157177 138 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm24240-201ENSMUST00000157785 135 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm23223-201ENSMUST00000158119 127 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm20718-201ENSMUST00000176058 259 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm8649-201ENSMUST00000181799 233 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Mir8118-201ENSMUST00000183962 129 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Mir6363-201ENSMUST00000184880 114 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm6801-201ENSMUST00000190697 339 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm37692-201ENSMUST00000192633 232 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm18551-201ENSMUST00000195594 642 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm44476-201ENSMUST00000196225 91 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm18982-201ENSMUST00000198118 529 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm44657-201ENSMUST00000208568 450 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm45687-201ENSMUST00000209454 155 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm18346-201ENSMUST00000216782 325 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm2446-201ENSMUST00000220144 772 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.09□□□□□ -2.07
Trbv1A0A0B4J1G7 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trbv1A0A0B4J1G7 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm25526-201ENSMUST00000104332 132 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm12935-201ENSMUST00000119352 246 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm12897-201ENSMUST00000120341 250 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm23980-201ENSMUST00000157135 158 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm6395-201ENSMUST00000167639 691 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24082-201ENSMUST00000175175 83 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm28650-201ENSMUST00000188413 411 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm9696-202ENSMUST00000191541 830 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm26458-201ENSMUST00000082832 128 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.08□□□□□ -2.08
Trbv1A0A0B4J1G7 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm22497-201ENSMUST00000104499 131 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm23911-201ENSMUST00000104596 134 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm6923-201ENSMUST00000118343 406 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm13443-201ENSMUST00000120770 555 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15272-201ENSMUST00000120865 233 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm13913-201ENSMUST00000121126 260 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm11430-201ENSMUST00000121317 217 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24532-201ENSMUST00000157951 286 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm23034-201ENSMUST00000158001 147 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm25490-201ENSMUST00000158734 130 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm17119-201ENSMUST00000163943 280 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm43992-201ENSMUST00000204358 197 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm5317-201ENSMUST00000204445 847 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms