Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm12190-201ENSMUST00000120001 187 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm8244-201ENSMUST00000121254 264 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm14821-201ENSMUST00000121975 435 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm15147-201ENSMUST00000122263 483 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm16327-201ENSMUST00000137146 228 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm23411-201ENSMUST00000157988 62 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm22085-201ENSMUST00000158344 110 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm22530-201ENSMUST00000158820 118 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm24518-201ENSMUST00000180275 94 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm26701-201ENSMUST00000181571 234 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm27952-201ENSMUST00000184748 105 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm29334-201ENSMUST00000190334 357 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm29479-201ENSMUST00000190352 455 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm38356-201ENSMUST00000194313 408 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm38088-201ENSMUST00000195829 241 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm9309-201ENSMUST00000223537 546 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm23518-201ENSMUST00000082835 153 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.5□□□□□ -1.85
H2afb3S4R1G7 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm4736-201ENSMUST00000100870 380 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm26273-201ENSMUST00000104180 131 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm12255-201ENSMUST00000117184 284 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm11566-201ENSMUST00000118550 203 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm4852-201ENSMUST00000121202 729 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm14972-201ENSMUST00000121780 364 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm23214-201ENSMUST00000122716 157 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm24780-201ENSMUST00000157635 143 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm22849-201ENSMUST00000157713 307 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm7925-201ENSMUST00000166690 401 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm22398-201ENSMUST00000174941 125 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm25731-201ENSMUST00000175167 125 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Mir3090-201ENSMUST00000175597 87 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm25019-201ENSMUST00000179732 110 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm28155-201ENSMUST00000191066 151 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm6510-201ENSMUST00000195916 574 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm44259-201ENSMUST00000204996 298 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm18462-201ENSMUST00000208112 417 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm46194-201ENSMUST00000218136 320 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm46193-201ENSMUST00000219399 364 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm25929-201ENSMUST00000082784 107 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm10242-201ENSMUST00000090064 330 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Olfr895-201ENSMUST00000093864 951 ntBASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
H2afb3S4R1G7 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm22021-201ENSMUST00000104353 107 ntBASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm11556-201ENSMUST00000120751 288 ntBASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm14919-201ENSMUST00000120839 390 ntBASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm23198-201ENSMUST00000158811 91 ntBASIC3.48□□□□□ -1.85
H2afb3S4R1G7 Gm17183-201ENSMUST00000171170 493 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms