Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm12513-201ENSMUST00000118617 352 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm5287-201ENSMUST00000120666 598 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm13555-201ENSMUST00000121668 319 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm26275-201ENSMUST00000157101 268 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm23168-201ENSMUST00000157156 143 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm25519-201ENSMUST00000158392 127 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm8292-201ENSMUST00000162574 396 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm23799-201ENSMUST00000175559 120 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm27893-201ENSMUST00000184408 194 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm37097-201ENSMUST00000193676 336 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm34701-202ENSMUST00000204685 360 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.54□□□□□ -2
Trem1Q9JKE2 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.54□□□□□ -2
Trem1Q9JKE2 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.54□□□□□ -2
Trem1Q9JKE2 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trem1Q9JKE2 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trem1Q9JKE2 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
Trem1Q9JKE2 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm11813-201ENSMUST00000118586 291 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm11829-201ENSMUST00000121003 282 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm23791-201ENSMUST00000122553 293 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm24840-201ENSMUST00000122603 147 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm20648-201ENSMUST00000175815 328 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.53□□□□□ -2
Trem1Q9JKE2 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trem1Q9JKE2 Scgb2b6-201ENSMUST00000188132 330 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm7299-201ENSMUST00000194441 581 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm18341-201ENSMUST00000197538 622 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm42958-201ENSMUST00000197595 318 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.53□□□□□ -2
Trem1Q9JKE2 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 AC132384.5-201ENSMUST00000218562 226 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.53□□□□□ -2
Trem1Q9JKE2 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trem1Q9JKE2 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trem1Q9JKE2 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trem1Q9JKE2 Snora7a-201ENSMUST00000082629 140 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Mir101b-201ENSMUST00000083622 97 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Mir184-201ENSMUST00000083662 69 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm25411-201ENSMUST00000083760 151 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Olfr895-201ENSMUST00000093864 951 ntBASIC2.53□□□□□ -2
Trem1Q9JKE2 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trem1Q9JKE2 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trem1Q9JKE2 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm8217-201ENSMUST00000119136 465 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm23540-201ENSMUST00000157543 164 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Mir1934-201ENSMUST00000158127 83 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm24813-201ENSMUST00000175310 84 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm37987-201ENSMUST00000194999 825 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm43193-201ENSMUST00000197732 441 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm45080-201ENSMUST00000206648 283 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm34779-201ENSMUST00000210036 263 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm18488-201ENSMUST00000215082 364 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Gm18242-201ENSMUST00000218455 542 ntBASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Trem1Q9JKE2 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm25169-201ENSMUST00000104190 129 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm14901-201ENSMUST00000119001 283 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm2830-201ENSMUST00000140330 385 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm26189-201ENSMUST00000179879 107 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm29602-201ENSMUST00000186887 442 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm36943-201ENSMUST00000194422 282 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms