Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm18595-201ENSMUST00000175736 1068 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm18448-201ENSMUST00000186286 599 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm17946-201ENSMUST00000186856 538 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm29604-201ENSMUST00000187176 163 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm18956-201ENSMUST00000192857 480 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm42828-201ENSMUST00000199669 469 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm44849-201ENSMUST00000207595 484 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm18704-201ENSMUST00000219736 446 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm22806-201ENSMUST00000082738 136 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm23431-201ENSMUST00000104006 107 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm24126-201ENSMUST00000104111 106 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm15161-201ENSMUST00000117340 387 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm15844-201ENSMUST00000118016 576 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm14794-201ENSMUST00000118181 192 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm15936-201ENSMUST00000118706 460 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Mup-ps10-201ENSMUST00000119626 556 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm11357-201ENSMUST00000119758 954 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm11556-201ENSMUST00000120751 288 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm16021-201ENSMUST00000121176 219 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm4916-201ENSMUST00000126139 642 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm25373-201ENSMUST00000158156 115 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm23205-201ENSMUST00000158671 103 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm17183-201ENSMUST00000171170 493 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Mir7217-201ENSMUST00000200304 62 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm32222-201ENSMUST00000203296 298 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gm9762-201ENSMUST00000036976 444 ntBASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trem3Q9JKE1 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Mir208b-201ENSMUST00000104735 77 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Mir1192-201ENSMUST00000116976 121 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm12412-201ENSMUST00000121867 328 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm25321-201ENSMUST00000122558 102 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm20660-201ENSMUST00000177515 289 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm27520-201ENSMUST00000184872 81 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm6059-201ENSMUST00000196903 340 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm46436-201ENSMUST00000221851 1294 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm22154-201ENSMUST00000083844 131 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Gm37296-201ENSMUST00000192728 2922 ntBASIC1.79□□□□□ -2.12
Trem3Q9JKE1 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm22497-201ENSMUST00000104499 131 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm24403-201ENSMUST00000104616 130 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm15025-201ENSMUST00000118434 418 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm12721-201ENSMUST00000120621 268 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm22534-201ENSMUST00000158173 104 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Atp2b4-208ENSMUST00000167348 243 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Adgrg4-206ENSMUST00000168724 531 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm24925-201ENSMUST00000178157 107 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm22252-201ENSMUST00000179316 79 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm28399-201ENSMUST00000186221 318 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm28572-201ENSMUST00000187444 318 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm28951-201ENSMUST00000190742 313 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm32033-201ENSMUST00000193483 339 ntBASIC1.78□□□□□ -2.12
Trem3Q9JKE1 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms