Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm8125-201ENSMUST00000216602 738 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm4987-201ENSMUST00000078326 408 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm4017-201ENSMUST00000084813 338 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim54Q9ERP3 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.81
Trim54Q9ERP3 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Mir669o-201ENSMUST00000103898 96 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm23532-201ENSMUST00000104569 112 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm12156-201ENSMUST00000119188 554 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Mir6341-201ENSMUST00000183490 121 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm27580-201ENSMUST00000183666 149 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm27249-201ENSMUST00000185049 328 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm28163-201ENSMUST00000187099 325 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm42621-201ENSMUST00000198114 275 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm42665-201ENSMUST00000202100 586 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm44208-201ENSMUST00000205199 421 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm45438-201ENSMUST00000210242 564 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm9712-201ENSMUST00000210842 311 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm23297-201ENSMUST00000083184 127 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Gm23645-201ENSMUST00000083228 108 ntBASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim54Q9ERP3 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm14622-201ENSMUST00000117117 468 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm11576-201ENSMUST00000117433 417 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm12025-201ENSMUST00000117768 144 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm14848-201ENSMUST00000121850 467 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm22563-201ENSMUST00000157333 269 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm24784-201ENSMUST00000157640 62 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm25066-201ENSMUST00000158145 123 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm24876-201ENSMUST00000158780 92 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Igkv17-134-201ENSMUST00000168310 348 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm8151-201ENSMUST00000184817 871 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Mir6372-201ENSMUST00000185114 109 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm28211-201ENSMUST00000190920 315 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm19498-201ENSMUST00000191128 331 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm42164-201ENSMUST00000198881 379 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm39147-201ENSMUST00000211376 465 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm24950-201ENSMUST00000082768 191 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm23971-201ENSMUST00000083317 191 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm23848-201ENSMUST00000083826 106 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm23849-201ENSMUST00000083833 191 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Gm26316-201ENSMUST00000083886 191 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim54Q9ERP3 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm37598-201ENSMUST00000194506 1301 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm14681-201ENSMUST00000118047 411 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm6274-201ENSMUST00000118173 797 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm13314-201ENSMUST00000118742 335 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms