Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm27715-201ENSMUST00000184714 260 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm18956-201ENSMUST00000192857 480 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm35570-201ENSMUST00000198730 681 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm6590-201ENSMUST00000203343 687 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.36□□□□□ -2.03
Lima1Q9ERG0 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm19233-201ENSMUST00000219772 936 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm24313-201ENSMUST00000082561 133 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Mir423-201ENSMUST00000083584 109 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm25628-201ENSMUST00000084002 105 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Mir682-201ENSMUST00000102281 96 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm26247-201ENSMUST00000116702 91 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm26280-201ENSMUST00000157096 101 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm27161-201ENSMUST00000183960 562 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm28282-201ENSMUST00000186072 186 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm37576-201ENSMUST00000194228 372 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm44478-201ENSMUST00000204875 114 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm23628-201ENSMUST00000082464 173 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.35□□□□□ -2.03
Lima1Q9ERG0 Gm14677-201ENSMUST00000117866 486 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm14652-201ENSMUST00000118479 235 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm14602-201ENSMUST00000118625 340 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm6574-201ENSMUST00000120037 362 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm2830-201ENSMUST00000140330 385 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm24212-201ENSMUST00000158258 132 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm22769-201ENSMUST00000158367 98 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Mir1927-201ENSMUST00000158579 109 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm4540-201ENSMUST00000170669 429 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.34□□□□□ -2.03
Lima1Q9ERG0 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm43541-201ENSMUST00000197208 581 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm42976-201ENSMUST00000200313 222 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm43550-201ENSMUST00000200597 303 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm9373-201ENSMUST00000208724 599 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm45452-201ENSMUST00000210905 177 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 AC158388.1-201ENSMUST00000225441 256 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Lima1Q9ERG0 Gm4945-201ENSMUST00000075152 453 ntBASIC2.34□□□□□ -2.03
Lima1Q9ERG0 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.34□□□□□ -2.04
Lima1Q9ERG0 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Lima1Q9ERG0 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Lima1Q9ERG0 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.34□□□□□ -2.04
Lima1Q9ERG0 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm9043-201ENSMUST00000119677 314 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm12368-201ENSMUST00000122251 434 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm23588-201ENSMUST00000157659 99 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm44519-201ENSMUST00000206486 122 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm45288-201ENSMUST00000210236 151 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Lima1Q9ERG0 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.33□□□□□ -2.04
Lima1Q9ERG0 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm26154-201ENSMUST00000102339 96 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm24120-201ENSMUST00000103978 129 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm12697-201ENSMUST00000118008 667 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm14843-201ENSMUST00000119596 212 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm23587-201ENSMUST00000157658 84 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm24691-201ENSMUST00000157762 140 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm25066-201ENSMUST00000158145 123 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 167.3 ms