Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm11433-201ENSMUST00000118318 228 ntBASIC2.37□□□□□ -2.03
Cpsf1Q9EPU4 Gm2005-201ENSMUST00000120759 542 ntBASIC2.37□□□□□ -2.03
Cpsf1Q9EPU4 Gm24174-201ENSMUST00000158933 111 ntBASIC2.37□□□□□ -2.03
Cpsf1Q9EPU4 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cpsf1Q9EPU4 Gm24757-201ENSMUST00000176987 371 ntBASIC2.37□□□□□ -2.03
Cpsf1Q9EPU4 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.37□□□□□ -2.03
Cpsf1Q9EPU4 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cpsf1Q9EPU4 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cpsf1Q9EPU4 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Gm15148-201ENSMUST00000117602 156 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Gm12876-201ENSMUST00000120975 408 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Gm15488-201ENSMUST00000121682 670 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Mir6950-201ENSMUST00000184438 73 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Gm29281-201ENSMUST00000188077 381 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Gm9628-201ENSMUST00000222169 725 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.36□□□□□ -2.03
Cpsf1Q9EPU4 Gm25966-201ENSMUST00000157169 117 ntBASIC2.35□□□□□ -2.03
Cpsf1Q9EPU4 Gm3102-201ENSMUST00000164236 489 ntBASIC2.35□□□□□ -2.03
Cpsf1Q9EPU4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.35□□□□□ -2.03
Cpsf1Q9EPU4 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.35□□□□□ -2.03
Cpsf1Q9EPU4 Gm45742-201ENSMUST00000212400 433 ntBASIC2.35□□□□□ -2.03
Cpsf1Q9EPU4 AC107369.1-201ENSMUST00000227373 860 ntBASIC2.35□□□□□ -2.03
Cpsf1Q9EPU4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Cpsf1Q9EPU4 Gm26080-201ENSMUST00000104069 131 ntBASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Gm14927-201ENSMUST00000120283 454 ntBASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Gm45189-201ENSMUST00000208567 363 ntBASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Gm24207-201ENSMUST00000082781 108 ntBASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Gm26063-201ENSMUST00000083378 107 ntBASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cpsf1Q9EPU4 Mir1192-201ENSMUST00000116976 121 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm24783-201ENSMUST00000157639 100 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm25051-201ENSMUST00000158602 249 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm43489-201ENSMUST00000196810 993 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm6059-201ENSMUST00000196903 340 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm6462-201ENSMUST00000081488 304 ntBASIC2.34□□□□□ -2.04
Cpsf1Q9EPU4 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm11819-201ENSMUST00000122192 372 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm28794-201ENSMUST00000185276 136 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm28383-201ENSMUST00000187563 139 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm29262-201ENSMUST00000190084 196 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm43371-201ENSMUST00000202838 1031 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm44266-201ENSMUST00000205235 500 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm44818-201ENSMUST00000206608 358 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm7407-201ENSMUST00000208301 568 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.33□□□□□ -2.04
Cpsf1Q9EPU4 Gm38104-201ENSMUST00000195121 1895 ntBASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Gm12814-201ENSMUST00000117091 846 ntBASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Gm24770-201ENSMUST00000158505 92 ntBASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Gm23967-201ENSMUST00000175062 78 ntBASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Snora33-201ENSMUST00000093556 129 ntBASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.32□□□□□ -2.04
Cpsf1Q9EPU4 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Gm25339-201ENSMUST00000157458 232 ntBASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Gm3851-201ENSMUST00000168653 318 ntBASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Gm23267-201ENSMUST00000178490 132 ntBASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Gm29884-201ENSMUST00000218403 453 ntBASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.31□□□□□ -2.04
Cpsf1Q9EPU4 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 Gm14882-201ENSMUST00000117216 218 ntBASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 Gm7123-201ENSMUST00000117647 213 ntBASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 Gm29167-201ENSMUST00000190024 377 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms