Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm43355-201ENSMUST00000196541 346 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 Gm8874-201ENSMUST00000196826 286 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 Gm44959-201ENSMUST00000209127 231 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 Gm45860-201ENSMUST00000212700 334 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 AC167140.1-201ENSMUST00000224710 403 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 Snord68-201ENSMUST00000082516 86 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Upf1Q9EPU0 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.84□□□□□ -1.63
Upf1Q9EPU0 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Svet1-201ENSMUST00000209370 3940 ntBASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Upf1Q9EPU0 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm11432-201ENSMUST00000117334 231 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm12261-201ENSMUST00000117499 645 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm22891-201ENSMUST00000158641 164 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm42832-201ENSMUST00000196361 745 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm34091-201ENSMUST00000200875 604 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm45200-201ENSMUST00000207434 919 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm45101-201ENSMUST00000208327 232 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm45498-201ENSMUST00000210346 283 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm45772-201ENSMUST00000212961 240 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 AC138290.2-201ENSMUST00000218822 369 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm22974-201ENSMUST00000083301 103 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Olfr575-201ENSMUST00000084812 957 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.83□□□□□ -1.64
Upf1Q9EPU0 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm14825-201ENSMUST00000113538 701 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm23213-201ENSMUST00000122715 313 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm24504-201ENSMUST00000157679 100 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm22314-201ENSMUST00000158007 281 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm25490-201ENSMUST00000158734 130 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm17162-201ENSMUST00000168538 473 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21842-201ENSMUST00000177552 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21626-201ENSMUST00000177791 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21562-201ENSMUST00000177888 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21539-201ENSMUST00000177925 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21599-201ENSMUST00000178249 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21914-201ENSMUST00000178452 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21723-201ENSMUST00000178692 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21916-201ENSMUST00000178771 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm24168-201ENSMUST00000178825 107 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21801-201ENSMUST00000178865 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21633-201ENSMUST00000178941 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21821-201ENSMUST00000179646 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21588-201ENSMUST00000180074 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21780-201ENSMUST00000180128 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21572-201ENSMUST00000180134 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm21529-201ENSMUST00000180175 498 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm29370-202ENSMUST00000187476 499 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm29352-201ENSMUST00000188054 544 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm29330-201ENSMUST00000190032 699 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm37682-201ENSMUST00000191776 522 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm36259-201ENSMUST00000197340 392 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm43393-201ENSMUST00000200147 194 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm45704-201ENSMUST00000212582 403 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms