Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Mir669d-201ENSMUST00000104644 121 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm12878-201ENSMUST00000118744 332 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm15536-201ENSMUST00000121411 114 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm24436-201ENSMUST00000157889 302 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm23415-201ENSMUST00000175519 83 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm38311-201ENSMUST00000192945 165 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm43096-201ENSMUST00000196173 421 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm25820-202ENSMUST00000197479 128 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm45146-201ENSMUST00000207108 221 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm2676-201ENSMUST00000207279 606 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm6913-201ENSMUST00000100019 348 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm15025-201ENSMUST00000118434 418 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm12891-201ENSMUST00000119358 240 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14843-201ENSMUST00000119596 212 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm5937-201ENSMUST00000119715 643 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm11252-201ENSMUST00000120572 939 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm17065-201ENSMUST00000165245 239 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22252-201ENSMUST00000179316 79 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm43967-201ENSMUST00000203787 301 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Gm23628-201ENSMUST00000082464 173 ntBASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc3Q9D6Y1 Snora36b-201ENSMUST00000104383 132 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14125-201ENSMUST00000113442 680 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm13046-201ENSMUST00000117391 501 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm13756-201ENSMUST00000117618 222 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14848-201ENSMUST00000121850 467 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22563-201ENSMUST00000157333 269 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm24532-201ENSMUST00000157951 286 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm24773-201ENSMUST00000158513 99 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22776-201ENSMUST00000178634 94 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm23767-201ENSMUST00000179278 94 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm26701-201ENSMUST00000181571 234 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm8676-201ENSMUST00000184206 637 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm44477-201ENSMUST00000199661 110 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm44520-201ENSMUST00000205447 802 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Gm19540-201ENSMUST00000221843 810 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.37□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22752-201ENSMUST00000102083 109 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14677-201ENSMUST00000117866 486 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm12617-201ENSMUST00000121268 381 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14840-201ENSMUST00000122135 594 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22957-201ENSMUST00000122511 123 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm24771-201ENSMUST00000158508 137 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22257-201ENSMUST00000158687 301 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm28637-201ENSMUST00000179424 345 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Gm44476-201ENSMUST00000196225 91 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Mir6925-201ENSMUST00000197857 70 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms