Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm24879-201ENSMUST00000158386 143 ntBASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Gm23053-201ENSMUST00000175136 96 ntBASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Gm20648-201ENSMUST00000175815 328 ntBASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Gm29389-201ENSMUST00000191562 352 ntBASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Ccdc39Q9D5Y1 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm13640-201ENSMUST00000118445 264 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm23470-201ENSMUST00000157129 120 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm22794-201ENSMUST00000157228 306 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm24691-201ENSMUST00000157762 140 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm17085-201ENSMUST00000165425 502 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm3370-201ENSMUST00000171785 500 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm23268-201ENSMUST00000175494 78 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm37081-201ENSMUST00000192034 196 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm36966-201ENSMUST00000192217 413 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm43582-201ENSMUST00000196149 343 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm43521-201ENSMUST00000197838 255 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm43107-201ENSMUST00000198729 255 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm44135-201ENSMUST00000205221 368 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Gm24254-201ENSMUST00000083702 104 ntBASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ccdc39Q9D5Y1 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm12492-201ENSMUST00000117665 564 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm11252-201ENSMUST00000120572 939 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm24443-201ENSMUST00000157242 132 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm22307-201ENSMUST00000180019 107 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm25528-201ENSMUST00000180264 132 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm29658-201ENSMUST00000185404 230 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm28356-202ENSMUST00000187566 858 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm29597-201ENSMUST00000188035 308 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm43245-201ENSMUST00000197603 468 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm43393-201ENSMUST00000200147 194 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm34314-201ENSMUST00000203622 367 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm44223-201ENSMUST00000204854 114 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm7751-201ENSMUST00000212868 709 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm18557-201ENSMUST00000218710 433 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm10025-201ENSMUST00000079568 372 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Snora23-201ENSMUST00000082517 184 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc39Q9D5Y1 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm11991-201ENSMUST00000119652 1074 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm23887-201ENSMUST00000122683 172 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm14562-201ENSMUST00000129885 543 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm25979-201ENSMUST00000157177 138 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm26041-201ENSMUST00000158148 108 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm22858-201ENSMUST00000174972 76 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Mir3112-201ENSMUST00000175431 82 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Snord93-201ENSMUST00000175580 71 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm24925-201ENSMUST00000178157 107 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm44526-201ENSMUST00000204664 121 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm29920-201ENSMUST00000206876 754 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm45530-201ENSMUST00000211658 225 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc39Q9D5Y1 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc39Q9D5Y1 Mir582-201ENSMUST00000103758 81 ntBASIC3.29□□□□□ -1.88
Ccdc39Q9D5Y1 Gm24120-201ENSMUST00000103978 129 ntBASIC3.29□□□□□ -1.88
Ccdc39Q9D5Y1 Gm14448-201ENSMUST00000116383 210 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms