Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
Ddx56Q9D0R4 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ddx56Q9D0R4 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ddx56Q9D0R4 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ddx56Q9D0R4 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm15180-201ENSMUST00000117745 492 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm13085-201ENSMUST00000118356 171 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm13122-201ENSMUST00000118380 453 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm7363-201ENSMUST00000119883 399 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm11420-201ENSMUST00000120047 402 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm13424-201ENSMUST00000122301 354 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm25605-201ENSMUST00000158364 124 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm24503-201ENSMUST00000158454 135 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm23523-201ENSMUST00000180190 107 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Mir6963-201ENSMUST00000183535 71 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Mir6371-201ENSMUST00000184470 111 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm37416-201ENSMUST00000193596 318 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm43884-201ENSMUST00000204251 559 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm45252-201ENSMUST00000211579 397 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 AC147101.1-201ENSMUST00000217964 312 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm17829-201ENSMUST00000219782 344 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm30155-201ENSMUST00000223458 339 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 AC115735.3-201ENSMUST00000227757 513 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm25257-201ENSMUST00000083907 110 ntBASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
Ddx56Q9D0R4 Gm37402-201ENSMUST00000194525 5000 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm12386-201ENSMUST00000117380 688 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm12782-201ENSMUST00000117519 727 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm14647-201ENSMUST00000119392 680 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm15377-201ENSMUST00000119594 246 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm14530-201ENSMUST00000122391 333 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm23886-201ENSMUST00000122684 313 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm25314-201ENSMUST00000178810 79 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm24168-201ENSMUST00000178825 107 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm37353-201ENSMUST00000194497 313 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm18551-201ENSMUST00000195594 642 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm43239-201ENSMUST00000200131 201 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm44520-201ENSMUST00000205447 802 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm19326-201ENSMUST00000219818 326 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm5548-201ENSMUST00000055878 397 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.09□□□□□ -1.75
Ddx56Q9D0R4 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Ddx56Q9D0R4 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Ddx56Q9D0R4 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Ddx56Q9D0R4 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm24281-201ENSMUST00000104234 136 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm14172-201ENSMUST00000118255 644 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm14282-201ENSMUST00000119484 240 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm15106-201ENSMUST00000119691 821 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm12884-201ENSMUST00000120371 325 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm26275-201ENSMUST00000157101 268 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm16569-201ENSMUST00000160526 314 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm6625-201ENSMUST00000177870 272 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Mir6938-201ENSMUST00000184173 63 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Mir6345-201ENSMUST00000184286 128 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm45031-201ENSMUST00000206800 288 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Gm45402-201ENSMUST00000211796 223 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 AC109212.1-201ENSMUST00000215561 427 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.08□□□□□ -1.76
Ddx56Q9D0R4 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms