Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm22229-201ENSMUST00000082987 108 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm23097-201ENSMUST00000083448 105 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm23775-201ENSMUST00000158991 249 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm22166-201ENSMUST00000178419 121 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm23288-201ENSMUST00000179213 121 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm27999-201ENSMUST00000183539 193 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm27760-201ENSMUST00000185048 114 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm28343-201ENSMUST00000185386 112 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm8392-201ENSMUST00000185647 835 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm19620-201ENSMUST00000195972 434 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm18384-201ENSMUST00000195974 808 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm44355-201ENSMUST00000200417 104 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm7675-201ENSMUST00000208828 686 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm7119-201ENSMUST00000221345 695 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 AC164297.5-201ENSMUST00000224365 198 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm9818-201ENSMUST00000050900 255 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm4017-201ENSMUST00000084813 338 ntBASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ddx28Q9CWT6 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.15□□□□□ -1.9
Ddx28Q9CWT6 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm26145-201ENSMUST00000104476 127 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm12025-201ENSMUST00000117768 144 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm15399-201ENSMUST00000118055 724 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm12268-201ENSMUST00000118398 442 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm15988-201ENSMUST00000118677 367 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm5762-201ENSMUST00000119204 258 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm14694-201ENSMUST00000121856 282 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm23602-201ENSMUST00000157258 132 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm22597-201ENSMUST00000157602 80 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm22516-201ENSMUST00000158266 124 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm29647-201ENSMUST00000188795 666 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm28504-201ENSMUST00000190977 666 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm35843-201ENSMUST00000193716 666 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm42475-201ENSMUST00000201212 295 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ddx28Q9CWT6 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm12492-201ENSMUST00000117665 564 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm14049-201ENSMUST00000121009 636 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm14804-201ENSMUST00000122322 508 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm22320-201ENSMUST00000157149 312 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm25967-201ENSMUST00000157168 147 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm22034-201ENSMUST00000157283 134 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm22290-201ENSMUST00000177655 107 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm22583-201ENSMUST00000178031 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms