Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm20648-201ENSMUST00000175815 328 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm27532-201ENSMUST00000183726 113 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Mir8103-201ENSMUST00000183945 107 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm38075-201ENSMUST00000191979 920 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm18982-201ENSMUST00000198118 529 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm45912-201ENSMUST00000210646 543 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm35558-202ENSMUST00000221819 499 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Smc1aQ9CU62 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
Smc1aQ9CU62 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Mir1195-201ENSMUST00000116818 98 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm11456-201ENSMUST00000121070 256 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm11229-201ENSMUST00000121993 437 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm20651-201ENSMUST00000177219 329 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm27861-201ENSMUST00000183920 214 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm25131-201ENSMUST00000082653 151 ntBASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Smc1aQ9CU62 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm11490-201ENSMUST00000118128 272 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm17183-201ENSMUST00000171170 493 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm28637-201ENSMUST00000179424 345 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm21489-201ENSMUST00000189668 818 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm18748-201ENSMUST00000198507 622 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm32222-201ENSMUST00000203296 298 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm45687-201ENSMUST00000209454 155 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Olfr815-201ENSMUST00000071557 951 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.26□□□□□ -1.89
Smc1aQ9CU62 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm9009-201ENSMUST00000117321 326 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm14358-201ENSMUST00000118458 403 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm15936-201ENSMUST00000118706 460 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm12368-201ENSMUST00000122251 434 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm24532-201ENSMUST00000157951 286 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm26585-201ENSMUST00000180890 630 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Mir7014-201ENSMUST00000183853 63 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm44657-201ENSMUST00000208568 450 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Smc1aQ9CU62 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Gm24691-201ENSMUST00000157762 140 ntBASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Gm24552-201ENSMUST00000158646 103 ntBASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Gm26061-201ENSMUST00000175584 108 ntBASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Mir6338-201ENSMUST00000183389 109 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms