Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm21821-201ENSMUST00000179646 498 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm21588-201ENSMUST00000180074 498 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm21780-201ENSMUST00000180128 498 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm21572-201ENSMUST00000180134 498 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm21529-201ENSMUST00000180175 498 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm28628-201ENSMUST00000187006 264 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm28629-201ENSMUST00000187309 263 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm29370-202ENSMUST00000187476 499 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm8023-201ENSMUST00000195298 903 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm25203-202ENSMUST00000200458 216 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Gm25203-201ENSMUST00000082842 215 ntBASIC3.28□□□□□ -1.88
Ccdc43Q9CR29 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm13640-201ENSMUST00000118445 264 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm12954-201ENSMUST00000118610 611 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm13406-201ENSMUST00000121991 256 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm25621-201ENSMUST00000157223 114 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm22187-201ENSMUST00000157819 129 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm22765-201ENSMUST00000158371 128 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm2966-201ENSMUST00000166052 481 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Mir6402-201ENSMUST00000183406 80 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm7948-201ENSMUST00000212607 844 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc43Q9CR29 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm13482-201ENSMUST00000119842 254 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm14815-201ENSMUST00000120060 488 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm12876-201ENSMUST00000120975 408 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm14389-201ENSMUST00000140453 241 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm24086-201ENSMUST00000175171 98 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm25194-201ENSMUST00000177987 79 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm27470-201ENSMUST00000184070 210 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm43932-201ENSMUST00000204499 52 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm44600-201ENSMUST00000208540 111 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm45395-201ENSMUST00000209891 559 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Gm23650-201ENSMUST00000083355 70 ntBASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc43Q9CR29 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm26504-201ENSMUST00000102033 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm14448-201ENSMUST00000116383 210 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm12155-201ENSMUST00000121267 160 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm23538-201ENSMUST00000157535 101 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm24876-201ENSMUST00000158780 92 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm3221-201ENSMUST00000164869 440 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm26502-201ENSMUST00000177732 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm25350-201ENSMUST00000177849 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm23446-201ENSMUST00000177977 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm26201-201ENSMUST00000178047 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm24711-201ENSMUST00000178062 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm24609-201ENSMUST00000178166 94 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms