Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm46193-201ENSMUST00000219399 364 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Use1Q9CQ56 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm23249-201ENSMUST00000083369 161 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Mir137-201ENSMUST00000083635 73 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 AF357428-201ENSMUST00000083815 69 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Use1Q9CQ56 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm11268-201ENSMUST00000118347 267 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm15106-201ENSMUST00000119691 821 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm25292-201ENSMUST00000122797 322 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm12238-201ENSMUST00000127764 124 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm23599-201ENSMUST00000157261 251 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm24879-201ENSMUST00000158386 143 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm23476-201ENSMUST00000158881 274 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm29288-201ENSMUST00000191582 901 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm18748-201ENSMUST00000198507 622 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm20948-201ENSMUST00000211091 449 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Snord104-201ENSMUST00000083192 70 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gm24254-201ENSMUST00000083702 104 ntBASIC2.51□□□□□ -2.01
Use1Q9CQ56 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Use1Q9CQ56 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
Use1Q9CQ56 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Use1Q9CQ56 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm24376-201ENSMUST00000104399 127 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm14358-201ENSMUST00000118458 403 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm14238-201ENSMUST00000120227 323 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm14363-201ENSMUST00000122304 409 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Use1Q9CQ56 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm24475-201ENSMUST00000157435 143 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm17166-201ENSMUST00000172006 431 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm27942-201ENSMUST00000184669 101 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm8023-201ENSMUST00000195298 903 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm6615-201ENSMUST00000199426 631 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm44478-201ENSMUST00000204875 114 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.5□□□□□ -2.01
Use1Q9CQ56 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.5□□□□□ -2.01
Use1Q9CQ56 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Gm22740-201ENSMUST00000083439 109 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Mir421-201ENSMUST00000083575 76 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.5□□□□□ -2.01
Use1Q9CQ56 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Use1Q9CQ56 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm23691-201ENSMUST00000101878 107 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm26504-201ENSMUST00000102033 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm14506-201ENSMUST00000121165 536 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm11430-201ENSMUST00000121317 217 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm22322-201ENSMUST00000157151 111 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm23168-201ENSMUST00000157156 143 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm17119-201ENSMUST00000163943 280 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm24086-201ENSMUST00000175171 98 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Mir3066-201ENSMUST00000175296 83 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm26502-201ENSMUST00000177732 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm25350-201ENSMUST00000177849 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm23446-201ENSMUST00000177977 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm26201-201ENSMUST00000178047 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm24711-201ENSMUST00000178062 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm24609-201ENSMUST00000178166 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm23265-201ENSMUST00000178321 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm22812-201ENSMUST00000178329 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm26246-201ENSMUST00000178388 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm25155-201ENSMUST00000178450 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm24760-201ENSMUST00000178530 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm22285-201ENSMUST00000178576 94 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms