Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm14910-201ENSMUST00000121037 1805 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Mir541-201ENSMUST00000102097 90 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm23879-201ENSMUST00000116874 126 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm12112-201ENSMUST00000117772 231 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm14971-201ENSMUST00000117980 663 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm12719-201ENSMUST00000118859 241 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm13729-201ENSMUST00000120328 406 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm6062-201ENSMUST00000120462 631 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm26310-201ENSMUST00000157766 117 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm25654-201ENSMUST00000158467 88 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm25051-201ENSMUST00000158602 249 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm10075-201ENSMUST00000162030 545 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm20526-201ENSMUST00000173416 158 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm21827-201ENSMUST00000178247 423 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm29031-201ENSMUST00000185316 614 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm29000-201ENSMUST00000185444 614 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm28204-201ENSMUST00000185934 614 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm28290-201ENSMUST00000186505 614 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm28161-201ENSMUST00000186669 614 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm9687-201ENSMUST00000189312 602 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm28749-209ENSMUST00000189599 614 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm29097-201ENSMUST00000190273 422 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm33163-201ENSMUST00000194504 614 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm43925-201ENSMUST00000203498 206 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm5265-201ENSMUST00000076828 342 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Gm6462-201ENSMUST00000081488 304 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.06□□□□□ -1.6
Trim11Q99PQ2 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm11633-201ENSMUST00000118176 444 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm25555-201ENSMUST00000158078 111 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm22537-201ENSMUST00000158172 199 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm24106-201ENSMUST00000175498 127 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm27470-201ENSMUST00000184070 210 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm27355-201ENSMUST00000185045 128 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm45236-201ENSMUST00000208632 229 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 AC154994.1-201ENSMUST00000217395 302 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm37899-201ENSMUST00000193116 8717 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim11Q99PQ2 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.05□□□□□ -1.6
Trim11Q99PQ2 AC124561.2-201ENSMUST00000226657 1973 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm24117-201ENSMUST00000103973 133 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm11576-201ENSMUST00000117433 417 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm15148-201ENSMUST00000117602 156 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm15058-201ENSMUST00000117689 458 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm12118-201ENSMUST00000119766 532 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm14877-201ENSMUST00000119803 478 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm23463-201ENSMUST00000122468 99 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm25223-201ENSMUST00000158200 110 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm45815-201ENSMUST00000220241 146 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Mir215-201ENSMUST00000083628 112 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim11Q99PQ2 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm12226-201ENSMUST00000144172 876 ntBASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Nron-204ENSMUST00000158971 370 ntBASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm22355-201ENSMUST00000175531 96 ntBASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm24862-201ENSMUST00000179103 79 ntBASIC5.03□□□□□ -1.6
Trim11Q99PQ2 Gm23310-201ENSMUST00000179105 79 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms