Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm34783-201ENSMUST00000209159 303 ntBASIC3.56□□□□□ -1.84
Msh4Q99MT2 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.56□□□□□ -1.84
Msh4Q99MT2 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Msh4Q99MT2 AC116589.4-201ENSMUST00000222390 216 ntBASIC3.56□□□□□ -1.84
Msh4Q99MT2 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.56□□□□□ -1.84
Msh4Q99MT2 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.56□□□□□ -1.84
Msh4Q99MT2 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Msh4Q99MT2 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Msh4Q99MT2 Gm24626-201ENSMUST00000082621 161 ntBASIC3.56□□□□□ -1.84
Msh4Q99MT2 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
Msh4Q99MT2 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.56□□□□□ -1.84
Msh4Q99MT2 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Msh4Q99MT2 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm14530-201ENSMUST00000122391 333 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm25341-201ENSMUST00000157461 268 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm20673-201ENSMUST00000177167 430 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm19193-201ENSMUST00000190263 590 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm38356-201ENSMUST00000194313 408 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm44142-201ENSMUST00000203358 311 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm34779-201ENSMUST00000210036 263 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm30155-201ENSMUST00000223458 339 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gm25581-201ENSMUST00000083410 164 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.55□□□□□ -1.84
Msh4Q99MT2 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Msh4Q99MT2 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm13314-201ENSMUST00000118742 335 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm8880-201ENSMUST00000121800 454 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm14364-201ENSMUST00000129209 267 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm22840-201ENSMUST00000158444 136 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm24552-201ENSMUST00000158646 103 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm24739-201ENSMUST00000158855 292 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm27392-201ENSMUST00000185041 101 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm29574-201ENSMUST00000186226 696 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm28828-201ENSMUST00000186601 696 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm28594-201ENSMUST00000187022 661 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm28159-201ENSMUST00000190296 696 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm19147-201ENSMUST00000199622 652 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm19726-201ENSMUST00000205008 240 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.54□□□□□ -1.84
Msh4Q99MT2 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.54□□□□□ -1.84
Msh4Q99MT2 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Msh4Q99MT2 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Msh4Q99MT2 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Msh4Q99MT2 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Msh4Q99MT2 Gm23123-201ENSMUST00000157648 144 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 Gm24727-201ENSMUST00000158231 144 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 Gm25369-201ENSMUST00000158848 132 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Msh4Q99MT2 Gm37617-201ENSMUST00000194309 159 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 Gm19572-201ENSMUST00000214326 338 ntBASIC3.53□□□□□ -1.84
Msh4Q99MT2 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms