Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm16289-201ENSMUST00000162079 183 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm27698-201ENSMUST00000184060 249 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm44964-201ENSMUST00000207011 273 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm6012-201ENSMUST00000210821 730 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm25404-201ENSMUST00000082970 107 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.18□□□□□ -1.9
Prpf39Q8K2Z2 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm22115-201ENSMUST00000103976 133 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm23923-201ENSMUST00000104108 133 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm14594-201ENSMUST00000118052 537 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm14590-201ENSMUST00000118934 537 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm11356-201ENSMUST00000118974 192 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm12723-201ENSMUST00000120700 451 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm11389-201ENSMUST00000121407 430 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm14411-201ENSMUST00000121798 914 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm14562-201ENSMUST00000129885 543 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm16588-201ENSMUST00000162889 355 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm20698-201ENSMUST00000175657 233 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm18417-201ENSMUST00000176564 648 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm14596-201ENSMUST00000180268 537 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm14595-201ENSMUST00000180335 537 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm7870-201ENSMUST00000184467 616 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm28390-201ENSMUST00000185212 700 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm29641-201ENSMUST00000188955 259 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm32340-201ENSMUST00000192883 259 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm32447-201ENSMUST00000194265 697 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm42805-201ENSMUST00000196158 276 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Prpf39Q8K2Z2 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm7853-201ENSMUST00000100708 478 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm14971-201ENSMUST00000117980 663 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm26101-201ENSMUST00000157246 105 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm25391-201ENSMUST00000157342 134 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21842-201ENSMUST00000177552 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21626-201ENSMUST00000177791 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21562-201ENSMUST00000177888 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21539-201ENSMUST00000177925 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm17522-201ENSMUST00000178144 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm24925-201ENSMUST00000178157 107 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21599-201ENSMUST00000178249 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21914-201ENSMUST00000178452 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21723-201ENSMUST00000178692 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21916-201ENSMUST00000178771 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21801-201ENSMUST00000178865 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21633-201ENSMUST00000178941 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21821-201ENSMUST00000179646 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21588-201ENSMUST00000180074 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21780-201ENSMUST00000180128 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21572-201ENSMUST00000180134 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm21529-201ENSMUST00000180175 498 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm29370-202ENSMUST00000187476 499 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm28384-201ENSMUST00000189079 463 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm37000-201ENSMUST00000193058 428 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm38333-201ENSMUST00000193608 604 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Gm44449-201ENSMUST00000203610 153 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.16□□□□□ -1.9
Prpf39Q8K2Z2 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms