Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm42474-201ENSMUST00000201073 505 ntBASIC2.27□□□□□ -2.05
Ccdc28aQ8CEI3 Gm44232-201ENSMUST00000204537 225 ntBASIC2.27□□□□□ -2.05
Ccdc28aQ8CEI3 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.27□□□□□ -2.05
Ccdc28aQ8CEI3 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.27□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.27□□□□□ -2.05
Ccdc28aQ8CEI3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Ccdc28aQ8CEI3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Ccdc28aQ8CEI3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Gm22769-201ENSMUST00000158367 98 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Gm7346-201ENSMUST00000169661 476 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Trbv18-201ENSMUST00000194256 294 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Gm5374-201ENSMUST00000222868 657 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm26154-201ENSMUST00000102339 96 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm14020-201ENSMUST00000118165 662 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm8580-201ENSMUST00000160295 464 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm17655-201ENSMUST00000167969 255 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm27161-201ENSMUST00000183960 562 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm3489-201ENSMUST00000190083 528 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm19202-201ENSMUST00000198096 808 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm43368-201ENSMUST00000200638 409 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm26439-201ENSMUST00000082592 106 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Gm44286-201ENSMUST00000204098 1487 ntBASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc28aQ8CEI3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm15126-201ENSMUST00000118631 833 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm14800-201ENSMUST00000122084 1272 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm12368-201ENSMUST00000122251 434 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm25270-201ENSMUST00000122606 138 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm2830-201ENSMUST00000140330 385 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm24854-201ENSMUST00000158025 98 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm24857-201ENSMUST00000158061 310 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Gm44665-201ENSMUST00000205381 251 ntBASIC2.24□□□□□ -2.05
Ccdc28aQ8CEI3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm13640-201ENSMUST00000118445 264 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm14588-201ENSMUST00000119895 172 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm24691-201ENSMUST00000157762 140 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm25460-201ENSMUST00000157954 127 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm37353-201ENSMUST00000194497 313 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Mir6925-201ENSMUST00000197857 70 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm43894-201ENSMUST00000203274 688 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm7675-201ENSMUST00000208828 686 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm45247-201ENSMUST00000210757 309 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Gm45409-201ENSMUST00000211486 252 ntBASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28aQ8CEI3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms