Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm18015-201ENSMUST00000214879 316 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 CT025526.1-201ENSMUST00000217327 267 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm18774-201ENSMUST00000218269 601 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm31849-201ENSMUST00000220306 375 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm9765-201ENSMUST00000043170 321 ntBASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc28bQ8CEG5 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Mir690-201ENSMUST00000102110 109 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25560-201ENSMUST00000104606 176 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm14815-201ENSMUST00000120060 488 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm14362-201ENSMUST00000121679 273 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm12095-201ENSMUST00000121962 816 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm23213-201ENSMUST00000122715 313 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25294-201ENSMUST00000122791 104 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm16274-201ENSMUST00000139251 592 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm15254-201ENSMUST00000149567 273 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm23470-201ENSMUST00000157129 120 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22755-201ENSMUST00000157143 100 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25341-201ENSMUST00000157461 268 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25365-201ENSMUST00000158852 121 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm26141-201ENSMUST00000175299 126 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25470-201ENSMUST00000175576 111 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm20773-201ENSMUST00000178940 681 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm17946-201ENSMUST00000186856 538 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm30341-201ENSMUST00000194363 289 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm37119-201ENSMUST00000195691 389 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43954-201ENSMUST00000204634 544 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm2676-201ENSMUST00000207279 606 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm18160-201ENSMUST00000214279 827 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm7540-201ENSMUST00000219764 926 ntBASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.1□□□□□ -1.91
Ccdc28bQ8CEG5 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm7853-201ENSMUST00000100708 478 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25088-201ENSMUST00000101803 79 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm11577-201ENSMUST00000118030 737 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25706-201ENSMUST00000157828 247 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm23312-201ENSMUST00000158774 102 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25670-201ENSMUST00000178423 107 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm26239-201ENSMUST00000178842 107 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm24267-201ENSMUST00000179841 107 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm26914-201ENSMUST00000182262 223 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm27313-201ENSMUST00000183500 142 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm29647-201ENSMUST00000188795 666 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm28504-201ENSMUST00000190977 666 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm36984-201ENSMUST00000192770 235 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm35843-201ENSMUST00000193716 666 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43541-201ENSMUST00000197208 581 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm17951-201ENSMUST00000198536 496 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm44923-201ENSMUST00000206673 85 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm3442-201ENSMUST00000216808 710 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm18113-201ENSMUST00000220630 303 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm7753-201ENSMUST00000221007 867 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms