Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm37692-201ENSMUST00000192633 232 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm43652-201ENSMUST00000196219 675 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm44990-201ENSMUST00000203922 217 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm45173-201ENSMUST00000206819 305 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm45312-201ENSMUST00000210566 311 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm46233-201ENSMUST00000217831 449 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm22979-201ENSMUST00000082609 159 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.61□□□□□ -1.83
Nup88Q8CEC0 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nup88Q8CEC0 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm14982-201ENSMUST00000121102 442 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm5958-201ENSMUST00000147698 297 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm23538-201ENSMUST00000157535 101 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm3370-201ENSMUST00000171785 500 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm20534-201ENSMUST00000172957 172 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm25194-201ENSMUST00000177987 79 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm27893-201ENSMUST00000184408 194 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Mir7081-201ENSMUST00000184490 75 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm28534-201ENSMUST00000187744 676 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm43104-201ENSMUST00000197234 311 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm16419-201ENSMUST00000221057 625 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm22245-201ENSMUST00000082479 103 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm23738-201ENSMUST00000082828 171 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm24490-201ENSMUST00000083803 98 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nup88Q8CEC0 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nup88Q8CEC0 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.6□□□□□ -1.83
Nup88Q8CEC0 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm22939-201ENSMUST00000103958 131 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm14987-201ENSMUST00000117820 676 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm13349-201ENSMUST00000118436 411 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm14835-201ENSMUST00000119039 315 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm15466-201ENSMUST00000122299 333 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm15878-201ENSMUST00000127561 306 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm22322-201ENSMUST00000157151 111 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm23668-201ENSMUST00000157465 111 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm24190-201ENSMUST00000157976 216 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm22516-201ENSMUST00000158266 124 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm25365-201ENSMUST00000158852 121 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm20542-201ENSMUST00000174582 372 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm29550-201ENSMUST00000185543 285 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm29263-201ENSMUST00000188718 463 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm18956-201ENSMUST00000192857 480 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Gm37290-201ENSMUST00000195775 339 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 AC116589.9-201ENSMUST00000221462 908 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Nup88Q8CEC0 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Nup88Q8CEC0 Gm26384-201ENSMUST00000102183 110 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm22709-201ENSMUST00000116893 111 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm11577-201ENSMUST00000118030 737 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm13751-201ENSMUST00000120280 752 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm15986-201ENSMUST00000122153 400 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm26061-201ENSMUST00000175584 108 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm43232-201ENSMUST00000201346 364 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms