Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm12370-201ENSMUST00000117809 604 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm14541-201ENSMUST00000118985 157 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm11876-201ENSMUST00000120002 269 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm12095-201ENSMUST00000121962 816 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm23380-201ENSMUST00000158448 103 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm25360-201ENSMUST00000178786 191 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm18296-201ENSMUST00000192475 783 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm42526-201ENSMUST00000198956 393 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm43224-201ENSMUST00000201567 898 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm45366-201ENSMUST00000209828 384 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm45860-201ENSMUST00000212700 334 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm18225-201ENSMUST00000216708 742 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 AC109214.2-201ENSMUST00000220089 358 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Snora23-201ENSMUST00000082517 184 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm26206-201ENSMUST00000082908 110 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm23297-201ENSMUST00000083184 127 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm24831-201ENSMUST00000116778 126 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm25507-201ENSMUST00000116981 144 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm13356-201ENSMUST00000121678 335 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm14766-201ENSMUST00000121689 367 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm14411-201ENSMUST00000121798 914 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm23538-201ENSMUST00000157535 101 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm22841-201ENSMUST00000158443 62 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm22584-201ENSMUST00000177935 92 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm24520-201ENSMUST00000179510 110 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm38075-201ENSMUST00000191979 920 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm45312-201ENSMUST00000210566 311 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm20304-201ENSMUST00000218168 444 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm26108-201ENSMUST00000083973 191 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Atg4aQ8C9S8 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm23063-201ENSMUST00000102350 93 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Mir599-201ENSMUST00000102378 88 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm24671-201ENSMUST00000104159 158 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm23911-201ENSMUST00000104596 134 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm14448-201ENSMUST00000116383 210 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm13454-201ENSMUST00000118166 483 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm14566-201ENSMUST00000118915 321 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm13687-201ENSMUST00000119857 282 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm14845-201ENSMUST00000121259 306 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm12226-201ENSMUST00000144172 876 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm23702-201ENSMUST00000158840 130 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm8224-201ENSMUST00000166178 497 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Snord93-201ENSMUST00000175580 71 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm28146-201ENSMUST00000185517 701 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm37104-201ENSMUST00000193278 196 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm9236-201ENSMUST00000196892 587 ntBASIC3.53□□□□□ -1.84
Atg4aQ8C9S8 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms