Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm26922-201ENSMUST00000082687 72 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm14577-201ENSMUST00000121134 256 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm29658-201ENSMUST00000185404 230 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm38329-201ENSMUST00000193473 427 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm43954-201ENSMUST00000204634 544 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm24611-201ENSMUST00000083272 107 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm7974-201ENSMUST00000117154 408 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm14591-201ENSMUST00000120407 518 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm23167-201ENSMUST00000157155 103 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm24394-201ENSMUST00000158141 123 ntBASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.74□□□□□ -1.97
Usp47Q8BY87 Gm14823-201ENSMUST00000117698 238 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Gm13273-201ENSMUST00000119737 159 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Gm12495-201ENSMUST00000119750 447 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Gm13210-201ENSMUST00000121483 273 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Gm15065-201ENSMUST00000121699 273 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Usp47Q8BY87 Gm22853-201ENSMUST00000174974 131 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Mir7679-201ENSMUST00000183379 63 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Usp47Q8BY87 Gm22683-201ENSMUST00000082854 137 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Gm25124-201ENSMUST00000083345 164 ntBASIC2.73□□□□□ -1.97
Usp47Q8BY87 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Usp47Q8BY87 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Usp47Q8BY87 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Usp47Q8BY87 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Usp47Q8BY87 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Usp47Q8BY87 Mir878-201ENSMUST00000104680 78 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm22713-201ENSMUST00000116895 130 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm12587-201ENSMUST00000120180 427 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm15147-201ENSMUST00000122263 483 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm25185-201ENSMUST00000157754 96 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm22556-201ENSMUST00000157803 100 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm25332-201ENSMUST00000158038 105 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Usp47Q8BY87 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm43582-201ENSMUST00000196149 343 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm18341-201ENSMUST00000197538 622 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm44266-201ENSMUST00000205235 500 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm17987-201ENSMUST00000206902 603 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm9375-201ENSMUST00000208899 903 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm6012-201ENSMUST00000210821 730 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
Usp47Q8BY87 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Usp47Q8BY87 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usp47Q8BY87 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Gm15108-201ENSMUST00000116160 803 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Gm15111-201ENSMUST00000122142 878 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Gm21809-201ENSMUST00000178495 468 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Gm27544-201ENSMUST00000185069 155 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Gm7039-201ENSMUST00000205138 346 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.71□□□□□ -1.98
Usp47Q8BY87 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Gm9628-201ENSMUST00000222169 725 ntBASIC2.71□□□□□ -1.98
Usp47Q8BY87 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Usp47Q8BY87 Gm11797-201ENSMUST00000121336 754 ntBASIC2.7□□□□□ -1.98
Usp47Q8BY87 Gm16363-201ENSMUST00000132460 877 ntBASIC2.7□□□□□ -1.98
Usp47Q8BY87 Gm25341-201ENSMUST00000157461 268 ntBASIC2.7□□□□□ -1.98
Usp47Q8BY87 Gm26024-201ENSMUST00000158657 322 ntBASIC2.7□□□□□ -1.98
Usp47Q8BY87 Gm17183-201ENSMUST00000171170 493 ntBASIC2.7□□□□□ -1.98
Usp47Q8BY87 Gm37692-201ENSMUST00000192633 232 ntBASIC2.7□□□□□ -1.98
Usp47Q8BY87 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.7□□□□□ -1.98
Usp47Q8BY87 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.7□□□□□ -1.98
Usp47Q8BY87 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Usp47Q8BY87 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Usp47Q8BY87 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Usp47Q8BY87 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.69□□□□□ -1.98
Usp47Q8BY87 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Usp47Q8BY87 Gm15382-201ENSMUST00000118011 537 ntBASIC2.69□□□□□ -1.98
Usp47Q8BY87 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.69□□□□□ -1.98
Usp47Q8BY87 Gm26406-201ENSMUST00000158503 124 ntBASIC2.69□□□□□ -1.98
Usp47Q8BY87 Gm15508-201ENSMUST00000160330 325 ntBASIC2.69□□□□□ -1.98
Usp47Q8BY87 Gm24638-201ENSMUST00000179807 132 ntBASIC2.69□□□□□ -1.98
Usp47Q8BY87 Gm27477-201ENSMUST00000184649 143 ntBASIC2.69□□□□□ -1.98
Usp47Q8BY87 Gm29604-201ENSMUST00000187176 163 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms