Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm24761-201ENSMUST00000179589 127 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm24488-201ENSMUST00000179934 127 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm25701-201ENSMUST00000179988 127 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm26431-201ENSMUST00000180199 127 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Mir193a-201ENSMUST00000083461 66 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Mir28a-201ENSMUST00000083560 86 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 AC153522.2-201ENSMUST00000218389 3853 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm24586-201ENSMUST00000116695 89 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm14359-201ENSMUST00000118883 424 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm14687-201ENSMUST00000120206 363 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm12872-201ENSMUST00000121835 320 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm24289-201ENSMUST00000157629 135 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm25835-201ENSMUST00000158917 144 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Mir6413-201ENSMUST00000184049 108 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm28967-201ENSMUST00000187351 281 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm38183-201ENSMUST00000193189 205 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm45327-201ENSMUST00000211612 565 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 AC153948.1-201ENSMUST00000219080 3838 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Snord15a-201ENSMUST00000083888 148 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Gm42486-201ENSMUST00000200369 3486 ntBASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Usp40Q8BWR4 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm43883-201ENSMUST00000204002 3750 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm22115-201ENSMUST00000103976 133 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm23923-201ENSMUST00000104108 133 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm13664-201ENSMUST00000117304 345 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm11971-201ENSMUST00000117715 288 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm13518-201ENSMUST00000120018 233 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm25362-201ENSMUST00000158854 105 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Ear-ps8-201ENSMUST00000161935 354 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm26141-201ENSMUST00000175299 126 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm22259-201ENSMUST00000178926 107 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm6501-201ENSMUST00000187178 916 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm43155-201ENSMUST00000202661 494 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm45080-201ENSMUST00000206648 283 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm44513-201ENSMUST00000206811 439 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm44824-201ENSMUST00000207021 229 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm26447-201ENSMUST00000082448 129 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm16261-201ENSMUST00000096813 205 ntBASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Usp40Q8BWR4 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.09□□□□□ -1.59
Usp40Q8BWR4 AC121598.3-201ENSMUST00000227179 1643 ntBASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Gm37498-201ENSMUST00000193524 4002 ntBASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Mir875-201ENSMUST00000104698 78 ntBASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Gm6797-201ENSMUST00000119440 512 ntBASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Gm12897-201ENSMUST00000120341 250 ntBASIC5.09□□□□□ -1.59
Usp40Q8BWR4 Gm6565-201ENSMUST00000121217 438 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms