Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm20651-201ENSMUST00000177219 329 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Mir5123-201ENSMUST00000177794 83 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm8676-201ENSMUST00000184206 637 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm3489-201ENSMUST00000190083 528 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm37866-201ENSMUST00000191950 696 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm44392-201ENSMUST00000196758 115 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm25203-202ENSMUST00000200458 216 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm7948-201ENSMUST00000212607 844 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm25203-201ENSMUST00000082842 215 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Mir184-201ENSMUST00000083662 69 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm14982-201ENSMUST00000121102 442 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm13406-201ENSMUST00000121991 256 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm24736-201ENSMUST00000158862 130 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm17162-201ENSMUST00000168538 473 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm27700-201ENSMUST00000185003 81 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm8392-201ENSMUST00000185647 835 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm6801-201ENSMUST00000190697 339 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm37987-201ENSMUST00000194999 825 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Gm43901-201ENSMUST00000203247 453 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc40Q8BI79 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm6664-201ENSMUST00000119138 468 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm14881-201ENSMUST00000120366 372 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm12617-201ENSMUST00000121268 381 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm11384-201ENSMUST00000121376 303 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm25621-201ENSMUST00000157223 114 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm23034-201ENSMUST00000158001 147 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm24905-201ENSMUST00000158129 104 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm23190-201ENSMUST00000180307 64 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Mir6353-201ENSMUST00000183596 113 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm45049-201ENSMUST00000207586 591 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm45288-201ENSMUST00000210236 151 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm6369-201ENSMUST00000069626 412 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm4945-201ENSMUST00000075152 453 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm9174-201ENSMUST00000078149 255 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm25199-201ENSMUST00000083095 104 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Mir208a-201ENSMUST00000083498 83 ntBASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc40Q8BI79 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm25526-201ENSMUST00000104332 132 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm13803-201ENSMUST00000117547 489 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm15452-201ENSMUST00000119877 240 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm14867-201ENSMUST00000120156 866 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm12607-201ENSMUST00000120724 493 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm14368-201ENSMUST00000145305 415 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm8023-201ENSMUST00000195298 903 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm44391-201ENSMUST00000198490 93 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms