Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm24581-201ENSMUST00000103962 133 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm11704-201ENSMUST00000120031 214 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm13868-201ENSMUST00000122411 294 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm26476-201ENSMUST00000122618 313 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm25283-201ENSMUST00000157272 77 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm26041-201ENSMUST00000158148 108 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm27308-201ENSMUST00000184807 233 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm27392-201ENSMUST00000185041 101 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm19147-201ENSMUST00000199622 652 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm45380-201ENSMUST00000210465 315 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm24037-201ENSMUST00000082871 180 ntBASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ubfd1Q78JW9 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm8757-201ENSMUST00000119660 372 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Spin2g-201ENSMUST00000178425 687 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm34015-201ENSMUST00000194908 451 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm44472-201ENSMUST00000204922 943 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm45772-201ENSMUST00000212961 240 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 mt-Tr-201ENSMUST00000082412 68 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm26263-201ENSMUST00000083281 164 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Mir323-201ENSMUST00000083683 86 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Ubfd1Q78JW9 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm23063-201ENSMUST00000102350 93 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm13475-201ENSMUST00000119290 234 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm14875-201ENSMUST00000120881 319 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm20534-201ENSMUST00000172957 172 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Mir7658-201ENSMUST00000184043 57 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm27385-201ENSMUST00000184747 104 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm18356-201ENSMUST00000185677 623 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm28661-201ENSMUST00000188231 681 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm28506-201ENSMUST00000189937 150 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm37617-201ENSMUST00000194309 159 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm44324-201ENSMUST00000198517 135 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm44149-201ENSMUST00000204256 226 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm25205-201ENSMUST00000082841 103 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm3867-201ENSMUST00000086108 279 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.67□□□□□ -1.82
Ubfd1Q78JW9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm15175-201ENSMUST00000117629 132 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm24419-201ENSMUST00000157875 332 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms