Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm13967-201ENSMUST00000120404 380 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm12956-201ENSMUST00000122184 414 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Mir7006-201ENSMUST00000183624 69 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm7837-201ENSMUST00000190873 412 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm44330-201ENSMUST00000200106 143 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm45006-201ENSMUST00000206078 690 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Mir31-201ENSMUST00000083474 106 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm23142-201ENSMUST00000101848 105 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm26240-201ENSMUST00000101893 105 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm22472-201ENSMUST00000104115 134 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm25560-201ENSMUST00000104606 176 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm14890-201ENSMUST00000117660 676 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm12647-201ENSMUST00000118977 265 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm13213-201ENSMUST00000119668 474 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm11398-201ENSMUST00000120330 320 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm15926-201ENSMUST00000120492 550 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm13396-201ENSMUST00000120617 271 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm14926-201ENSMUST00000120650 508 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm12779-201ENSMUST00000121496 143 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm14559-201ENSMUST00000121745 496 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm24217-201ENSMUST00000158260 133 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm6374-201ENSMUST00000159051 788 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm17065-201ENSMUST00000165245 239 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm3191-201ENSMUST00000167139 346 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm36934-201ENSMUST00000192007 306 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm37692-201ENSMUST00000192633 232 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm45367-201ENSMUST00000210171 347 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm29884-201ENSMUST00000218403 453 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm25755-201ENSMUST00000083396 107 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Mir452-201ENSMUST00000093629 85 ntBASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scaf4Q6PFF0 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Mir599-201ENSMUST00000102378 88 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm11935-201ENSMUST00000118608 399 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm22814-201ENSMUST00000157452 104 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm22598-201ENSMUST00000157600 127 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm26412-201ENSMUST00000157666 55 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm23759-201ENSMUST00000158351 268 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm28921-201ENSMUST00000190219 378 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm37050-201ENSMUST00000193464 466 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm38076-201ENSMUST00000193889 450 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm46190-201ENSMUST00000219650 427 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm45815-201ENSMUST00000220241 146 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Gm7093-201ENSMUST00000223004 581 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scaf4Q6PFF0 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Scaf4Q6PFF0 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms