Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm37961-201ENSMUST00000192729 299 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm17956-201ENSMUST00000199931 838 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm3338-201ENSMUST00000220982 269 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Mir17-201ENSMUST00000083574 84 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm11322-201ENSMUST00000118095 435 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm9059-201ENSMUST00000118319 183 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm13314-201ENSMUST00000118742 335 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm15364-201ENSMUST00000119618 585 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm14303-201ENSMUST00000121320 171 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm13430-201ENSMUST00000121366 288 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm24720-201ENSMUST00000157518 166 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Mir1946b-201ENSMUST00000157853 133 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm25902-201ENSMUST00000158493 318 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm25360-201ENSMUST00000178786 191 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm26746-201ENSMUST00000181722 487 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm27624-201ENSMUST00000185047 177 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Mir181a-2-201ENSMUST00000083489 76 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rnf220Q6PDX6 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Snord98-201ENSMUST00000116819 65 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm14013-201ENSMUST00000119006 270 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm14269-201ENSMUST00000120455 306 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm13153-201ENSMUST00000120969 637 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm23546-201ENSMUST00000158211 137 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm8114-201ENSMUST00000172225 484 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm20450-201ENSMUST00000173652 147 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21842-201ENSMUST00000177552 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21626-201ENSMUST00000177791 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21562-201ENSMUST00000177888 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21539-201ENSMUST00000177925 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21599-201ENSMUST00000178249 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21914-201ENSMUST00000178452 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21723-201ENSMUST00000178692 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21916-201ENSMUST00000178771 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21801-201ENSMUST00000178865 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21633-201ENSMUST00000178941 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21821-201ENSMUST00000179646 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21588-201ENSMUST00000180074 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21780-201ENSMUST00000180128 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21572-201ENSMUST00000180134 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm21529-201ENSMUST00000180175 498 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm28579-201ENSMUST00000186143 369 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm29370-202ENSMUST00000187476 499 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm38356-201ENSMUST00000194313 408 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm18982-201ENSMUST00000198118 529 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm17775-201ENSMUST00000198542 258 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm43039-201ENSMUST00000202883 963 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm19726-201ENSMUST00000205008 240 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm44927-201ENSMUST00000207573 716 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms