Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm44212-201ENSMUST00000205016 897 ntBASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.2□□□□□ -1.9
Herc4Q6PAV2 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.2□□□□□ -1.9
Herc4Q6PAV2 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.2□□□□□ -1.9
Herc4Q6PAV2 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.2□□□□□ -1.9
Herc4Q6PAV2 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Gm22740-201ENSMUST00000083439 109 ntBASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Herc4Q6PAV2 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm22936-201ENSMUST00000103955 126 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm25539-201ENSMUST00000116886 122 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm12492-201ENSMUST00000117665 564 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm15312-201ENSMUST00000118827 271 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm15177-201ENSMUST00000120491 577 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm15309-201ENSMUST00000121644 240 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm15986-201ENSMUST00000122153 400 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm24517-201ENSMUST00000122560 107 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm22765-201ENSMUST00000158371 128 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Mir6917-201ENSMUST00000184111 61 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm28666-201ENSMUST00000186649 274 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm28802-201ENSMUST00000188624 944 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm18956-201ENSMUST00000192857 480 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm45192-201ENSMUST00000206749 283 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Snora23-201ENSMUST00000082517 184 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm23516-201ENSMUST00000093728 107 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc4Q6PAV2 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm24671-201ENSMUST00000104159 158 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm7123-201ENSMUST00000117647 213 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm11253-201ENSMUST00000118486 201 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm9119-201ENSMUST00000118866 495 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm14815-201ENSMUST00000120060 488 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm6651-201ENSMUST00000189471 271 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm18488-201ENSMUST00000215082 364 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm19563-201ENSMUST00000222031 270 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Gm23932-201ENSMUST00000082914 107 ntBASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Herc4Q6PAV2 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm11490-201ENSMUST00000118128 272 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm12803-201ENSMUST00000118907 821 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm11835-201ENSMUST00000120635 663 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm24836-201ENSMUST00000122609 108 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm6265-201ENSMUST00000149263 231 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm18448-201ENSMUST00000186286 599 ntBASIC3.17□□□□□ -1.9
Herc4Q6PAV2 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Herc4Q6PAV2 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms