Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm12897-201ENSMUST00000120341 250 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Gm11438-201ENSMUST00000121582 189 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
Trim27Q62158 Gm23325-201ENSMUST00000157422 129 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Mir5129-201ENSMUST00000174938 78 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Gm23568-201ENSMUST00000177960 92 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Gm24829-201ENSMUST00000179245 92 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Gm27700-201ENSMUST00000185003 81 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim27Q62158 Gm38333-201ENSMUST00000193608 604 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Gm37533-201ENSMUST00000193848 545 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Gm43652-201ENSMUST00000196219 675 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim27Q62158 Gm45173-201ENSMUST00000206819 305 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim27Q62158 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.62□□□□□ -1.83
Trim27Q62158 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.62□□□□□ -1.83
Trim27Q62158 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trim27Q62158 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trim27Q62158 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim27Q62158 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm24671-201ENSMUST00000104159 158 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm14594-201ENSMUST00000118052 537 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm14833-201ENSMUST00000118345 1027 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm14590-201ENSMUST00000118934 537 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm14253-201ENSMUST00000122112 639 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm22957-201ENSMUST00000122511 123 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm23118-201ENSMUST00000122657 187 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm25365-201ENSMUST00000158852 121 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm23269-201ENSMUST00000178701 107 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm23860-201ENSMUST00000179446 132 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm14596-201ENSMUST00000180268 537 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm14595-201ENSMUST00000180335 537 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim27Q62158 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm9068-201ENSMUST00000217393 455 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim27Q62158 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm46994-201ENSMUST00000221523 219 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm5955-201ENSMUST00000222712 219 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim27Q62158 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm22970-201ENSMUST00000083304 186 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Gm24490-201ENSMUST00000083803 98 ntBASIC3.61□□□□□ -1.83
Trim27Q62158 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim27Q62158 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim27Q62158 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim27Q62158 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
Trim27Q62158 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim27Q62158 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim27Q62158 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim27Q62158 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim27Q62158 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim27Q62158 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Trim27Q62158 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim27Q62158 Gm12598-201ENSMUST00000117333 830 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm7071-201ENSMUST00000120458 462 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm23025-201ENSMUST00000158769 111 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim27Q62158 Gm28358-202ENSMUST00000189292 223 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm37104-201ENSMUST00000193278 196 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm43217-201ENSMUST00000199513 367 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm44030-201ENSMUST00000204865 432 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm17991-201ENSMUST00000208139 297 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim27Q62158 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim27Q62158 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim27Q62158 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.6□□□□□ -1.83
Trim27Q62158 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim27Q62158 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim27Q62158 Snora23-201ENSMUST00000082517 184 ntBASIC3.6□□□□□ -1.83
Trim27Q62158 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim27Q62158 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim27Q62158 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim27Q62158 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.59□□□□□ -1.83
Trim27Q62158 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim27Q62158 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim27Q62158 Gm13482-201ENSMUST00000119842 254 ntBASIC3.59□□□□□ -1.83
Trim27Q62158 Gm14867-201ENSMUST00000120156 866 ntBASIC3.59□□□□□ -1.83
Trim27Q62158 Gm14578-201ENSMUST00000122166 391 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms