Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm16242-201ENSMUST00000117741 334 ntBASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm12797-201ENSMUST00000118645 273 ntBASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm15244-201ENSMUST00000121122 130 ntBASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm25520-201ENSMUST00000158389 118 ntBASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm25015-201ENSMUST00000158400 128 ntBASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Mir6993-201ENSMUST00000184912 65 ntBASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm25078-201ENSMUST00000082530 107 ntBASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm23300-201ENSMUST00000082712 125 ntBASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm37115-201ENSMUST00000193750 2849 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm23472-201ENSMUST00000101806 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm24751-201ENSMUST00000157844 102 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm22769-201ENSMUST00000158367 98 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm24497-201ENSMUST00000177868 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm26337-201ENSMUST00000178000 79 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm19774-201ENSMUST00000190667 114 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim41Q5NCC3 AC150901.1-201ENSMUST00000208407 145 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm23625-201ENSMUST00000082457 100 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm25813-201ENSMUST00000082748 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm24950-201ENSMUST00000082768 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm23444-201ENSMUST00000082922 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm23971-201ENSMUST00000083317 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm23849-201ENSMUST00000083833 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm26316-201ENSMUST00000083886 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Gm37764-201ENSMUST00000194664 2150 ntBASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim41Q5NCC3 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm44860-201ENSMUST00000208473 2346 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm42843-201ENSMUST00000196328 3616 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm15151-201ENSMUST00000117106 177 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm5379-201ENSMUST00000120973 826 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm23044-201ENSMUST00000157891 100 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm27249-201ENSMUST00000185049 328 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm43250-201ENSMUST00000196536 273 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm42694-201ENSMUST00000196951 358 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm25203-202ENSMUST00000200458 216 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 AC134577.1-201ENSMUST00000227572 295 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm25203-201ENSMUST00000082842 215 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm43527-201ENSMUST00000198749 3178 ntBASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Trim41Q5NCC3 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm3584-201ENSMUST00000173822 2565 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm24263-201ENSMUST00000104059 107 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm24132-201ENSMUST00000104745 91 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm11631-201ENSMUST00000119220 156 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm23219-201ENSMUST00000158123 87 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm22989-201ENSMUST00000158313 86 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm24944-201ENSMUST00000158330 128 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm17152-201ENSMUST00000172430 535 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm36954-201ENSMUST00000195362 363 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm45315-201ENSMUST00000209283 333 ntBASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim41Q5NCC3 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Gm11572-201ENSMUST00000119164 120 ntBASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 177.9 ms