Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm23668-201ENSMUST00000157465 111 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm24212-201ENSMUST00000158258 132 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm10177-202ENSMUST00000161698 207 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm27861-201ENSMUST00000183920 214 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm5551-201ENSMUST00000199720 690 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm35931-201ENSMUST00000203931 448 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm44519-201ENSMUST00000206486 122 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm45380-201ENSMUST00000210465 315 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Usp28Q5I043 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm10025-201ENSMUST00000079568 372 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm22578-201ENSMUST00000083730 107 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Usp28Q5I043 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Usp28Q5I043 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm12492-201ENSMUST00000117665 564 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm11943-201ENSMUST00000119473 327 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm12137-201ENSMUST00000119565 346 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm14008-201ENSMUST00000120483 274 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm13443-201ENSMUST00000120770 555 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm15147-201ENSMUST00000122263 483 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm23032-201ENSMUST00000157995 107 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm24768-201ENSMUST00000158512 94 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm17085-201ENSMUST00000165425 502 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm28623-201ENSMUST00000187219 192 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm43722-201ENSMUST00000196054 124 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm44161-201ENSMUST00000203532 253 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm44830-201ENSMUST00000207667 584 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.78□□□□□ -1.96
Usp28Q5I043 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usp28Q5I043 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usp28Q5I043 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.78□□□□□ -1.96
Usp28Q5I043 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
Usp28Q5I043 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Usp28Q5I043 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp28Q5I043 Mir466n-201ENSMUST00000104798 94 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm26247-201ENSMUST00000116702 91 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm11268-201ENSMUST00000118347 267 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm14358-201ENSMUST00000118458 403 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm14159-201ENSMUST00000119832 451 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm11321-201ENSMUST00000121257 902 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm3221-201ENSMUST00000164869 440 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm28412-201ENSMUST00000187243 177 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm29597-201ENSMUST00000188035 308 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm43043-201ENSMUST00000196579 412 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm42828-201ENSMUST00000199669 469 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm45273-201ENSMUST00000211559 281 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Usp28Q5I043 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.77□□□□□ -1.97
Usp28Q5I043 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm22970-201ENSMUST00000083304 186 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
Usp28Q5I043 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Usp28Q5I043 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Usp28Q5I043 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.77□□□□□ -1.97
Usp28Q5I043 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.76□□□□□ -1.97
Usp28Q5I043 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Usp28Q5I043 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Usp28Q5I043 Gm14794-201ENSMUST00000118181 192 ntBASIC2.76□□□□□ -1.97
Usp28Q5I043 Gm14007-201ENSMUST00000118288 210 ntBASIC2.76□□□□□ -1.97
Usp28Q5I043 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC2.76□□□□□ -1.97
Usp28Q5I043 Gm11693-201ENSMUST00000119625 565 ntBASIC2.76□□□□□ -1.97
Usp28Q5I043 Gm16021-201ENSMUST00000121176 219 ntBASIC2.76□□□□□ -1.97
Usp28Q5I043 Gm22561-201ENSMUST00000157331 84 ntBASIC2.76□□□□□ -1.97
Usp28Q5I043 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Usp28Q5I043 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms