Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm44208-201ENSMUST00000205199 421 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm44927-201ENSMUST00000207573 716 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm45049-201ENSMUST00000207586 591 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm18703-201ENSMUST00000215318 333 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm20304-201ENSMUST00000218168 444 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 AC121898.1-201ENSMUST00000227599 288 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm2710-201ENSMUST00000073196 603 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Mir878-201ENSMUST00000104680 78 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm12225-201ENSMUST00000117995 298 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm2066-201ENSMUST00000118046 389 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm13751-201ENSMUST00000120280 752 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm25107-201ENSMUST00000122472 129 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm24393-201ENSMUST00000158135 97 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Nron-204ENSMUST00000158971 370 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Mir3066-201ENSMUST00000175296 83 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm19898-201ENSMUST00000177490 251 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm24925-201ENSMUST00000178157 107 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm11392-201ENSMUST00000181419 710 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm27599-201ENSMUST00000183758 174 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Mir7j-201ENSMUST00000184427 122 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Mir6899-201ENSMUST00000184798 64 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm29576-201ENSMUST00000188020 678 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm28354-201ENSMUST00000190904 678 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm43899-201ENSMUST00000203675 246 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm44425-201ENSMUST00000203739 429 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm44223-201ENSMUST00000204854 114 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm45590-201ENSMUST00000209715 262 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm22810-201ENSMUST00000082741 158 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm25202-201ENSMUST00000082838 191 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Gm23932-201ENSMUST00000082914 107 ntBASIC2.91□□□□□ -1.94
Trim40Q3UWA4 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim40Q3UWA4 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Trim40Q3UWA4 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Trim40Q3UWA4 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Trim40Q3UWA4 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
Trim40Q3UWA4 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.9□□□□□ -1.94
Trim40Q3UWA4 Gm23530-201ENSMUST00000104564 137 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm12814-201ENSMUST00000117091 846 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm14681-201ENSMUST00000118047 411 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm15112-201ENSMUST00000120152 860 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm14785-201ENSMUST00000120185 539 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Mir6933-201ENSMUST00000184982 81 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm18775-201ENSMUST00000190763 586 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm37097-201ENSMUST00000193676 336 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm42924-201ENSMUST00000197261 185 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm6012-201ENSMUST00000210821 730 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm2628-201ENSMUST00000218019 426 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms