Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm24210-201ENSMUST00000158263 133 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Gm24773-201ENSMUST00000158513 99 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Mir5099-201ENSMUST00000175257 74 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Mir6402-201ENSMUST00000183406 80 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Mir7014-201ENSMUST00000183853 63 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Gm29330-201ENSMUST00000190032 699 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Gm28098-201ENSMUST00000191361 699 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.58□□□□□ -2
Trim43aQ3TL54 Gm17937-201ENSMUST00000197908 742 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Gm19202-201ENSMUST00000198096 808 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Gm44088-201ENSMUST00000204595 237 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trim43aQ3TL54 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.58□□□□□ -2
Trim43aQ3TL54 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.58□□□□□ -2
Trim43aQ3TL54 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trim43aQ3TL54 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim43aQ3TL54 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Trim43aQ3TL54 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim43aQ3TL54 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim43aQ3TL54 Mir208b-201ENSMUST00000104735 77 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm23642-201ENSMUST00000157858 258 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm16289-201ENSMUST00000162079 183 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm17655-201ENSMUST00000167969 255 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm20450-201ENSMUST00000173652 147 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm24813-201ENSMUST00000175310 84 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm26701-201ENSMUST00000181571 234 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm29513-201ENSMUST00000185741 202 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm28779-201ENSMUST00000189678 323 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm19498-201ENSMUST00000191128 331 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm29740-201ENSMUST00000193182 655 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm45395-201ENSMUST00000209891 559 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm4945-201ENSMUST00000075152 453 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm26494-201ENSMUST00000083154 143 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Mir423-201ENSMUST00000083584 109 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm24493-201ENSMUST00000083805 143 ntBASIC2.57□□□□□ -2
Trim43aQ3TL54 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim43aQ3TL54 Gm14020-201ENSMUST00000118165 662 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm6574-201ENSMUST00000120037 362 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm12071-201ENSMUST00000121968 469 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm2830-201ENSMUST00000140330 385 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm6788-201ENSMUST00000166459 270 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm17064-201ENSMUST00000167690 452 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim43aQ3TL54 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm28623-201ENSMUST00000187219 192 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm42578-201ENSMUST00000199960 194 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm45696-201ENSMUST00000212088 985 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim43aQ3TL54 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim43aQ3TL54 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm26439-201ENSMUST00000082592 106 ntBASIC2.56□□□□□ -2
Trim43aQ3TL54 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Trim43aQ3TL54 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trim43aQ3TL54 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trim43aQ3TL54 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim43aQ3TL54 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm13046-201ENSMUST00000117391 501 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm14652-201ENSMUST00000118479 235 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm16017-201ENSMUST00000119834 208 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm24922-201ENSMUST00000158511 102 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm8292-201ENSMUST00000162574 396 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm43264-201ENSMUST00000202284 325 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm44256-201ENSMUST00000203304 335 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm19233-201ENSMUST00000219772 936 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trim43aQ3TL54 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm5471-201ENSMUST00000072732 337 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm22293-201ENSMUST00000083314 109 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Gm4017-201ENSMUST00000084813 338 ntBASIC2.55□□□□□ -2
Trim43aQ3TL54 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim43aQ3TL54 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trim43aQ3TL54 Mir466k-201ENSMUST00000116774 122 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm12598-201ENSMUST00000117333 830 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm12238-201ENSMUST00000127764 124 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.54□□□□□ -2
Trim43aQ3TL54 Mir1927-201ENSMUST00000158579 109 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm23415-201ENSMUST00000175519 83 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm28900-201ENSMUST00000185232 156 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Mir7232-201ENSMUST00000197929 74 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 229.5 ms