Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm13687-201ENSMUST00000119857 282 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm16358-201ENSMUST00000146046 210 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm25058-201ENSMUST00000157365 128 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm24780-201ENSMUST00000157635 143 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm23078-201ENSMUST00000157848 148 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm23779-201ENSMUST00000157938 64 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm8600-201ENSMUST00000186320 905 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm3010-201ENSMUST00000198805 448 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm4045-201ENSMUST00000204076 310 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm45006-201ENSMUST00000206078 690 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm18016-201ENSMUST00000216119 801 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm23678-201ENSMUST00000083157 107 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm23461-201ENSMUST00000083265 107 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.96□□□□□ -1.78
Usp39Q3TIX9 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm23063-201ENSMUST00000102350 93 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Snord72-201ENSMUST00000104549 81 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm11698-201ENSMUST00000117948 455 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm14013-201ENSMUST00000119006 270 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm13511-201ENSMUST00000121167 363 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm22453-201ENSMUST00000122801 318 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm26348-201ENSMUST00000157528 240 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm26028-201ENSMUST00000158660 294 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm4761-201ENSMUST00000178086 582 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm24464-201ENSMUST00000179697 107 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm25939-201ENSMUST00000179876 191 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Usp39Q3TIX9 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm14566-201ENSMUST00000118915 321 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm12486-201ENSMUST00000120887 541 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm9003-201ENSMUST00000121810 482 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm12226-201ENSMUST00000144172 876 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm26102-201ENSMUST00000157251 284 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm25908-201ENSMUST00000157624 98 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm5552-201ENSMUST00000197149 515 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm6105-201ENSMUST00000200580 624 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm44032-201ENSMUST00000204841 166 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm6303-201ENSMUST00000210123 471 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm26447-201ENSMUST00000082448 129 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Gm23451-201ENSMUST00000083328 122 ntBASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Usp39Q3TIX9 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms