Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col9a1Q05722 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col9a1Q05722 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col9a1Q05722 Mdga2-203ENSMUST00000113942 423 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm13797-201ENSMUST00000121792 120 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm25980-201ENSMUST00000157176 218 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm22845-201ENSMUST00000157712 104 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm24010-201ENSMUST00000157731 282 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm22967-201ENSMUST00000157956 239 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm25438-201ENSMUST00000158281 110 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC5.31□□□□□ -1.56
Col9a1Q05722 Mir6914-201ENSMUST00000184999 69 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm37361-201ENSMUST00000194345 132 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm44052-201ENSMUST00000203382 396 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC5.31□□□□□ -1.56
Col9a1Q05722 AC160550.3-201ENSMUST00000226818 400 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm10042-201ENSMUST00000079884 78 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 AC122840.2-201ENSMUST00000221030 2659 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col9a1Q05722 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col9a1Q05722 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col9a1Q05722 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col9a1Q05722 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col9a1Q05722 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col9a1Q05722 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col9a1Q05722 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Col9a1Q05722 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col9a1Q05722 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col9a1Q05722 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.31□□□□□ -1.56
Col9a1Q05722 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col9a1Q05722 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col9a1Q05722 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col9a1Q05722 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col9a1Q05722 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm24581-201ENSMUST00000103962 133 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm22477-201ENSMUST00000122569 316 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm24505-201ENSMUST00000157682 126 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm26219-201ENSMUST00000175216 71 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm27220-201ENSMUST00000183453 262 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm37923-201ENSMUST00000191624 161 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm18427-201ENSMUST00000195422 515 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm44932-201ENSMUST00000206799 121 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col9a1Q05722 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col9a1Q05722 n-R5s166-201ENSMUST00000082898 121 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col9a1Q05722 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.3□□□□□ -1.56
Col9a1Q05722 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col9a1Q05722 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col9a1Q05722 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Col9a1Q05722 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm13343-201ENSMUST00000116474 105 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm7079-201ENSMUST00000119726 171 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm15786-201ENSMUST00000121079 450 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm6762-201ENSMUST00000121769 289 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm24650-201ENSMUST00000157105 103 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm22883-201ENSMUST00000157376 106 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm35405-201ENSMUST00000218754 400 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm40810-201ENSMUST00000219149 253 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm46998-201ENSMUST00000221444 330 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm23511-201ENSMUST00000083084 164 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 381.5 ms