Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm12564-201ENSMUST00000119860 321 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm14619-201ENSMUST00000120480 168 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm14841-201ENSMUST00000121067 758 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm6079-201ENSMUST00000121356 404 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm25965-201ENSMUST00000157170 93 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm24060-201ENSMUST00000157494 95 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm25714-201ENSMUST00000158626 296 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm16232-201ENSMUST00000162856 167 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm27540-201ENSMUST00000184950 187 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Mir6418-201ENSMUST00000185075 115 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm29062-201ENSMUST00000186032 694 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm28255-201ENSMUST00000187101 694 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm28288-201ENSMUST00000191019 214 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm8790-201ENSMUST00000194108 322 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm8069-201ENSMUST00000197887 154 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm44485-201ENSMUST00000199569 137 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm4036-201ENSMUST00000220842 626 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm4987-201ENSMUST00000078326 408 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col8a1Q00780 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col8a1Q00780 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col8a1Q00780 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm38152-201ENSMUST00000195389 3566 ntBASIC3.84□□□□□ -1.8
Col8a1Q00780 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Col8a1Q00780 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Col8a1Q00780 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Col8a1Q00780 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.84□□□□□ -1.8
Col8a1Q00780 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC3.84□□□□□ -1.8
Col8a1Q00780 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col8a1Q00780 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.83□□□□□ -1.8
Col8a1Q00780 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm23746-201ENSMUST00000104229 125 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm12704-201ENSMUST00000119789 464 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm13396-201ENSMUST00000120617 271 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm13692-201ENSMUST00000120774 371 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm11430-201ENSMUST00000121317 217 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm22814-201ENSMUST00000157452 104 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm23892-201ENSMUST00000158105 130 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm26585-201ENSMUST00000180890 630 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm43407-201ENSMUST00000199816 317 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm42665-201ENSMUST00000202100 586 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm18320-201ENSMUST00000211304 595 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm24410-201ENSMUST00000083433 107 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm22744-201ENSMUST00000083444 65 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col8a1Q00780 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm37514-201ENSMUST00000194512 2753 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
Col8a1Q00780 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col8a1Q00780 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.83□□□□□ -1.8
Col8a1Q00780 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col8a1Q00780 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm43130-201ENSMUST00000197721 3907 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm13477-201ENSMUST00000121620 2687 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm45211-201ENSMUST00000206208 2650 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col8a1Q00780 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col8a1Q00780 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col8a1Q00780 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm23142-201ENSMUST00000101848 105 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm26240-201ENSMUST00000101893 105 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm11576-201ENSMUST00000117433 417 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm12156-201ENSMUST00000119188 554 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm25150-201ENSMUST00000157121 60 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm27723-201ENSMUST00000157398 63 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm23782-201ENSMUST00000157939 120 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms