Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm28802-201ENSMUST00000188624 944 ntBASIC2.66□□□□□ -1.98
Cux1P53564 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Gm19599-201ENSMUST00000218898 358 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Gm46312-201ENSMUST00000220961 420 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Cux1P53564 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.66□□□□□ -1.98
Cux1P53564 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
Cux1P53564 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Cux1P53564 Gm11438-201ENSMUST00000121582 189 ntBASIC2.65□□□□□ -1.99
Cux1P53564 Gm25888-201ENSMUST00000157778 302 ntBASIC2.65□□□□□ -1.99
Cux1P53564 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Cux1P53564 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Cux1P53564 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Cux1P53564 Gm14880-201ENSMUST00000117581 292 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Gm22036-201ENSMUST00000157279 215 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Gm20526-201ENSMUST00000173416 158 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Gm22853-201ENSMUST00000174974 131 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC2.64□□□□□ -1.99
Cux1P53564 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Gm7530-201ENSMUST00000218466 605 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cux1P53564 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.64□□□□□ -1.99
Cux1P53564 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cux1P53564 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Cux1P53564 Gm12782-201ENSMUST00000117519 727 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm12697-201ENSMUST00000118008 667 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.63□□□□□ -1.99
Cux1P53564 Gm23234-201ENSMUST00000157304 134 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm3102-201ENSMUST00000164236 489 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.63□□□□□ -1.99
Cux1P53564 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm43406-201ENSMUST00000200356 334 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Cux1P53564 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm25520-201ENSMUST00000158389 118 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm24174-201ENSMUST00000158933 111 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm27894-201ENSMUST00000184177 92 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
Cux1P53564 Gm28383-201ENSMUST00000187563 139 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm29262-201ENSMUST00000190084 196 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.63□□□□□ -1.99
Cux1P53564 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
Cux1P53564 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Cux1P53564 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Cux1P53564 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Cux1P53564 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.62□□□□□ -1.99
Cux1P53564 Gm22673-201ENSMUST00000104415 131 ntBASIC2.62□□□□□ -1.99
Cux1P53564 Gm24840-201ENSMUST00000122603 147 ntBASIC2.62□□□□□ -1.99
Cux1P53564 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.62□□□□□ -1.99
Cux1P53564 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Cux1P53564 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.62□□□□□ -1.99
Cux1P53564 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.62□□□□□ -1.99
Cux1P53564 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.62□□□□□ -1.99
Cux1P53564 AC132446.1-201ENSMUST00000222655 226 ntBASIC2.62□□□□□ -1.99
Cux1P53564 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.62□□□□□ -1.99
Cux1P53564 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.62□□□□□ -1.99
Cux1P53564 CT030662.3-201ENSMUST00000228751 476 ntBASIC2.62□□□□□ -1.99
Cux1P53564 Gm10794-201ENSMUST00000099624 207 ntBASIC2.62□□□□□ -1.99
Cux1P53564 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.61□□□□□ -1.99
Cux1P53564 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.61□□□□□ -1.99
Cux1P53564 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Cux1P53564 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.61□□□□□ -1.99
Cux1P53564 Gm28163-201ENSMUST00000187099 325 ntBASIC2.61□□□□□ -1.99
Cux1P53564 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.61□□□□□ -1.99
Cux1P53564 Gm45687-201ENSMUST00000209454 155 ntBASIC2.61□□□□□ -1.99
Cux1P53564 AC129323.1-201ENSMUST00000216733 470 ntBASIC2.61□□□□□ -1.99
Cux1P53564 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.61□□□□□ -1.99
Cux1P53564 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cux1P53564 Gm15951-201ENSMUST00000118377 400 ntBASIC2.6□□□□□ -1.99
Cux1P53564 Mir6374-201ENSMUST00000184003 107 ntBASIC2.6□□□□□ -1.99
Cux1P53564 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.6□□□□□ -1.99
Cux1P53564 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.6□□□□□ -1.99
Cux1P53564 Gm37431-201ENSMUST00000195102 111 ntBASIC2.6□□□□□ -1.99
Cux1P53564 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.6□□□□□ -1.99
Cux1P53564 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.6□□□□□ -1.99
Cux1P53564 Gm20304-201ENSMUST00000218168 444 ntBASIC2.6□□□□□ -1.99
Cux1P53564 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.6□□□□□ -1.99
Cux1P53564 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.6□□□□□ -1.99
Cux1P53564 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cux1P53564 Gm15714-201ENSMUST00000117168 250 ntBASIC2.59□□□□□ -1.99
Cux1P53564 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.59□□□□□ -1.99
Cux1P53564 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.59□□□□□ -1.99
Cux1P53564 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC2.59□□□□□ -1.99
Cux1P53564 Gm5322-201ENSMUST00000206142 699 ntBASIC2.59□□□□□ -1.99
Cux1P53564 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.59□□□□□ -1.99
Cux1P53564 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cux1P53564 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.59□□□□□ -1.99
Cux1P53564 Gm14885-201ENSMUST00000117969 496 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm12513-201ENSMUST00000118617 352 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm24965-201ENSMUST00000157922 106 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm24902-201ENSMUST00000158126 123 ntBASIC2.58□□□□□ -2
Cux1P53564 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.58□□□□□ -2
Cux1P53564 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cux1P53564 Gm44555-201ENSMUST00000209008 148 ntBASIC2.58□□□□□ -2
Cux1P53564 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cux1P53564 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms