Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Shmt1P50431 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Shmt1P50431 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Shmt1P50431 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Shmt1P50431 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm11566-201ENSMUST00000118550 203 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Gm11813-201ENSMUST00000118586 291 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Gm15147-201ENSMUST00000122263 483 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Gm26256-201ENSMUST00000122499 186 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm8207-201ENSMUST00000171204 502 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Gm29408-201ENSMUST00000187536 216 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm44371-201ENSMUST00000204148 467 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm19126-201ENSMUST00000207896 509 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm19326-201ENSMUST00000219818 326 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Shmt1P50431 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Shmt1P50431 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Shmt1P50431 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Shmt1P50431 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.15□□□□□ -1.75
Shmt1P50431 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Shmt1P50431 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Shmt1P50431 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Shmt1P50431 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Shmt1P50431 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Shmt1P50431 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Shmt1P50431 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Shmt1P50431 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Shmt1P50431 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Shmt1P50431 Gm25765-201ENSMUST00000104100 132 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm22472-201ENSMUST00000104115 134 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm23322-201ENSMUST00000104464 167 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
Shmt1P50431 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm23213-201ENSMUST00000122715 313 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.14□□□□□ -1.75
Shmt1P50431 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Shmt1P50431 Gm10357-201ENSMUST00000159886 264 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm24968-201ENSMUST00000179817 107 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm26960-201ENSMUST00000182263 412 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm28552-201ENSMUST00000190725 388 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm37791-201ENSMUST00000195081 286 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm19202-201ENSMUST00000198096 808 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.14□□□□□ -1.75
Shmt1P50431 Gm44083-201ENSMUST00000203114 337 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm45730-201ENSMUST00000212560 395 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm3829-201ENSMUST00000222362 619 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm23443-201ENSMUST00000082916 128 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm23645-201ENSMUST00000083228 108 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Shmt1P50431 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.14□□□□□ -1.75
Shmt1P50431 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Shmt1P50431 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Shmt1P50431 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.14□□□□□ -1.75
Shmt1P50431 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Shmt1P50431 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Shmt1P50431 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Shmt1P50431 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Shmt1P50431 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Shmt1P50431 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Shmt1P50431 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Shmt1P50431 Mir599-201ENSMUST00000102378 88 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm24581-201ENSMUST00000103962 133 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm25560-201ENSMUST00000104606 176 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm11673-201ENSMUST00000117846 331 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm12509-201ENSMUST00000118033 609 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm14926-201ENSMUST00000120650 508 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm13092-201ENSMUST00000136346 260 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm26276-201ENSMUST00000157099 109 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm24729-201ENSMUST00000158225 137 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm16569-201ENSMUST00000160526 314 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm3851-201ENSMUST00000168653 318 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm27233-201ENSMUST00000184030 307 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Shmt1P50431 Gm21673-201ENSMUST00000186640 436 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm21135-201ENSMUST00000189023 436 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm29334-201ENSMUST00000190334 357 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms