Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22328-201ENSMUST00000158074 112 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Gm24217-201ENSMUST00000158260 133 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Gm21850-201ENSMUST00000179792 359 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Mir6338-201ENSMUST00000183389 109 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Gm19908-201ENSMUST00000204684 391 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Gm18127-201ENSMUST00000208479 725 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rfx1P48377 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rfx1P48377 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rfx1P48377 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rfx1P48377 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Rfx1P48377 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Rfx1P48377 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Rfx1P48377 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC5.18□□□□□ -1.58
Rfx1P48377 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Rfx1P48377 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Rfx1P48377 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Rfx1P48377 Gm13378-201ENSMUST00000117483 336 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm14586-201ENSMUST00000119571 408 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24596-201ENSMUST00000122504 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23137-201ENSMUST00000157559 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24584-201ENSMUST00000157972 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26001-201ENSMUST00000157989 103 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25211-201ENSMUST00000177553 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24540-201ENSMUST00000177627 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25256-201ENSMUST00000177746 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22822-201ENSMUST00000177941 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Rnu6-201ENSMUST00000178023 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23151-201ENSMUST00000178061 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23402-201ENSMUST00000178130 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25245-201ENSMUST00000178139 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24753-201ENSMUST00000178183 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25829-201ENSMUST00000178275 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22092-201ENSMUST00000178290 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24486-201ENSMUST00000178420 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23217-201ENSMUST00000178482 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26245-201ENSMUST00000178491 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24019-201ENSMUST00000178620 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23610-201ENSMUST00000178659 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23092-201ENSMUST00000178688 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25709-201ENSMUST00000178844 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25547-201ENSMUST00000178877 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25312-201ENSMUST00000178972 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24722-201ENSMUST00000179017 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22969-201ENSMUST00000179018 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25101-201ENSMUST00000179057 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26378-201ENSMUST00000179093 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24873-201ENSMUST00000179101 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23934-201ENSMUST00000179111 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22623-201ENSMUST00000179244 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26243-201ENSMUST00000179260 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25737-201ENSMUST00000179274 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22618-201ENSMUST00000179376 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24182-201ENSMUST00000179419 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24242-201ENSMUST00000179440 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24863-201ENSMUST00000179499 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25064-201ENSMUST00000179535 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26295-201ENSMUST00000179690 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23712-201ENSMUST00000179713 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22823-201ENSMUST00000179754 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22360-201ENSMUST00000179775 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24978-201ENSMUST00000179782 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24967-201ENSMUST00000179791 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25173-201ENSMUST00000179794 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24870-201ENSMUST00000179897 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22288-201ENSMUST00000179904 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22645-201ENSMUST00000180010 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24565-201ENSMUST00000180099 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23805-201ENSMUST00000180129 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23512-201ENSMUST00000180237 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25327-201ENSMUST00000180263 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26058-201ENSMUST00000180294 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22418-201ENSMUST00000180326 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm32308-201ENSMUST00000203053 280 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.18□□□□□ -1.58
Rfx1P48377 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 AC164297.3-201ENSMUST00000224238 94 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23629-201ENSMUST00000082465 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23924-201ENSMUST00000082474 108 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22246-201ENSMUST00000082478 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22749-201ENSMUST00000082490 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22747-201ENSMUST00000082495 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23296-201ENSMUST00000082555 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22063-201ENSMUST00000082560 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26129-201ENSMUST00000082719 107 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms