Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Cdx2P43241 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.15□□□□□ -2.07
Cdx2P43241 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Cdx2P43241 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Cdx2P43241 Gm13080-201ENSMUST00000120556 420 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Gm24010-201ENSMUST00000157731 282 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Gm24601-201ENSMUST00000157970 143 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Gm27155-201ENSMUST00000183716 898 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Gm27991-201ENSMUST00000184804 137 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Gm19641-201ENSMUST00000188432 417 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Gm37281-201ENSMUST00000192412 439 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Cdx2P43241 Gm5655-201ENSMUST00000221078 901 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Cdx2P43241 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.14□□□□□ -2.07
Cdx2P43241 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Cdx2P43241 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Cdx2P43241 Gm12697-201ENSMUST00000118008 667 ntBASIC2.13□□□□□ -2.07
Cdx2P43241 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.13□□□□□ -2.07
Cdx2P43241 Gm25332-201ENSMUST00000158038 105 ntBASIC2.13□□□□□ -2.07
Cdx2P43241 Gm23223-201ENSMUST00000158119 127 ntBASIC2.13□□□□□ -2.07
Cdx2P43241 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Cdx2P43241 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Cdx2P43241 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC2.13□□□□□ -2.07
Cdx2P43241 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Cdx2P43241 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Cdx2P43241 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Cdx2P43241 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Cdx2P43241 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.13□□□□□ -2.07
Cdx2P43241 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.13□□□□□ -2.07
Cdx2P43241 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Cdx2P43241 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Cdx2P43241 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Cdx2P43241 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.13□□□□□ -2.07
Cdx2P43241 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Cdx2P43241 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Cdx2P43241 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Cdx2P43241 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Cdx2P43241 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Cdx2P43241 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Cdx2P43241 Mir804-201ENSMUST00000103251 95 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm23010-201ENSMUST00000104151 126 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm25560-201ENSMUST00000104606 176 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm23476-201ENSMUST00000158881 274 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm5929-201ENSMUST00000166883 487 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Cdx2P43241 Gm21489-201ENSMUST00000189668 818 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm10925-201ENSMUST00000189941 678 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm43669-201ENSMUST00000198229 436 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm44083-201ENSMUST00000203114 337 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Cdx2P43241 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Cdx2P43241 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Cdx2P43241 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.12□□□□□ -2.07
Cdx2P43241 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Cdx2P43241 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.12□□□□□ -2.07
Cdx2P43241 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cdx2P43241 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Cdx2P43241 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Cdx2P43241 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdx2P43241 Snora36b-201ENSMUST00000104383 132 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Gm25728-201ENSMUST00000104525 159 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Gm15037-201ENSMUST00000120358 259 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdx2P43241 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdx2P43241 Mir5136-201ENSMUST00000175573 76 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Gm27999-201ENSMUST00000183539 193 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cdx2P43241 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Cdx2P43241 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Cdx2P43241 Gm20811-201ENSMUST00000190500 553 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Gm44274-201ENSMUST00000203417 256 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Gm45382-201ENSMUST00000210607 151 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.11□□□□□ -2.07
Cdx2P43241 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Cdx2P43241 Gm25628-201ENSMUST00000084002 105 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cdx2P43241 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cdx2P43241 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.11□□□□□ -2.07
Cdx2P43241 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cdx2P43241 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.1□□□□□ -2.07
Cdx2P43241 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cdx2P43241 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.1□□□□□ -2.07
Cdx2P43241 Gm11460-201ENSMUST00000118200 361 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms